PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP043224.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 538aa MW: 58726.6 Da PI: 6.9084

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP043224.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.6	1.7e-30	304	362	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ PCP043224.1 304 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGHHNHP 362 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MESAASDHSI HNCRSIEEQH VILSPKTADD HDHHGKRVVD ELDFFAHTGR LKEARDHTAE 60 VKEECDHHGV GQEKQLPDTG LNLLTTYTSS DKSSMDVGTS SSRNMEDKHG TNELAVLQAE 120 LGRMNVENQR LRGVIHQVNT NYQALQVHLV KLKNQKTDQQ TAEQHKMNLN GSEVLKEKQL 180 MNEFNNLAPR QFMDMGRAQK DELSQCSHEG CRSQDCSGSS PRNDIVESME CCKGTSHVHR 240 DISGKSSTTG AEDSPDHEFQ GWIPKKVPKL MSPREVEQAS SETMSMIKKA RVSVRARSEA 300 SMMSDGCQWR KYGQKMAKGN PCPRAYYRCT MAAGCPVRKQ VQRCAEDRTI LITTYEGHHN 360 HPLPPAAMAM ASTTSAAASM LLSGSNHSAD GLISSNSFLA RTGLPNCPPS LATLSATAPF 420 PTVTLDLTHT PTSSEMPLGQ PNQLPSNFPH NNLMSVPQIL GQALCNQPKF SVLDSLQGLD 480 STTHSLADKV NAATAAITAD PNFTMALVAA ITSIVGNVQS NNNTNNNVSP RHDSGNST

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MESAASDHSI HNCRSIEEQH VILSPKTADD HDHHGKRVVD ELDFFAHTGR LKEARDHTAE  60
VKEECDHHGV GQEKQLPDTG LNLLTTYTSS DKSSMDVGTS SSRNMEDKHG TNELAVLQAE  120
LGRMNVENQR LRGVIHQVNT NYQALQVHLV KLKNQKTDQQ TAEQHKMNLN GSEVLKEKQL  180
MNEFNNLAPR QFMDMGRAQK DELSQCSHEG CRSQDCSGSS PRNDIVESME CCKGTSHVHR  240
DISGKSSTTG AEDSPDHEFQ GWIPKKVPKL MSPREVEQAS SETMSMIKKA RVSVRARSEA  300
SMMSDGCQWR KYGQKMAKGN PCPRAYYRCT MAAGCPVRKQ VQRCAEDRTI LITTYEGHHN  360
HPLPPAAMAM ASTTSAAASM LLSGSNHSAD GLISSNSFLA RTGLPNCPPS LATLSATAPF  420
PTVTLDLTHT PTSSEMPLGQ PNQLPSNFPH NNLMSVPQIL GQALCNQPKF SVLDSLQGLD  480
STTHSLADKV NAATAAITAD PNFTMALVAA ITSIVGNVQS NNNTNNNVSP RHDSGNST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-101	WRKY family protein