PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP041642.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 805aa MW: 88319.2 Da PI: 7.4561

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP041642.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.6e-09	622	659	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gL+ +qV++WF N R + PCP041642.1 622 FEHflHPYPTDTDKHMLATQTGLSRNQVSNWFINARVR 659 564459******************************87 PP
2	BELL	100.2	1.6e-32	471	539	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e q+kkakLl ++eeV +r kqy++q+q+v++sFe vagl+sa+pY+ +Al+a+SrhFrcL + i++q+ PCP041642.1 471 EYQQKKAKLLYMQEEVSRRCKQYHQQMQMVVASFESVAGLNSATPYICMALNAVSRHFRCLTNSIKDQL 539 789***************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 805 aa Download sequence
MEMSGFRHES HVAQQSRRDK LRVHQTSSPP HHLDNLANNS GKLPLHPGLN PHIVQVRNVR 60 NANLLYDPTM FSSEMLDFSI NANAPLSAHR ITMACHDQDL GAAQPAGESQ NFGNWRSTLN 120 PPQSIDWVNN YTSGYQDVVQ SSLANSSADQ ISSHHVAQKH LGGGAMHFSS PSLKYVNTLQ 180 DVVTSASQGT QQDQLEMASI VHQRIMENEF VRVPSYGNQS NTLRFNNASN SWMDRQPIEN 240 RHNWSSGGGG GLEFSTANSV DEEMRTGMSS DSNQQGLSLS LSSNPPSNKL PVAQLIGSQD 300 LHASTDDDDD HHHALKDLQN SKMGKSSGGY LCSITKPSII SKACGKSHQD ILGNSSTSAY 360 RSTGPLGPFT GYATILKSSK FLKPAQQLLD EFCRVSDSKI LKTCEASERM SGDVSASASV 420 SISIEAGNAT ETEVVAKRNN SGASSTTFYG STEISSDGGA ASISSESFWP EYQQKKAKLL 480 YMQEEVSRRC KQYHQQMQMV VASFESVAGL NSATPYICMA LNAVSRHFRC LTNSIKDQLK 540 HTRKALGEEY MSSSVTAAGT AGCCSKGEKN FAKLKYMGLG FQKHNKSGGG SLVGFSEPQQ 600 HVWRPQRGLP ERSVAILRTW LFEHFLHPYP TDTDKHMLAT QTGLSRNQVS NWFINARVRV 660 WKPMVEEIHI LETRGGSLET GQDPINKDGN SANEGTSSRP NNDHQLSMNV MPDRQLKCLG 720 DAEQRNQDMK RSRLECQVSS SMDGGLMGFV QDQRGGFEAG GLGAVSLTLG LRHGVESAQQ 780 QQQLQQQEDQ LRRQLGGQMI RDYVG

Sequence ? help Back to Top

Protein Sequence Length: 805 aa Download sequence

MEMSGFRHES HVAQQSRRDK LRVHQTSSPP HHLDNLANNS GKLPLHPGLN PHIVQVRNVR  60
NANLLYDPTM FSSEMLDFSI NANAPLSAHR ITMACHDQDL GAAQPAGESQ NFGNWRSTLN  120
PPQSIDWVNN YTSGYQDVVQ SSLANSSADQ ISSHHVAQKH LGGGAMHFSS PSLKYVNTLQ  180
DVVTSASQGT QQDQLEMASI VHQRIMENEF VRVPSYGNQS NTLRFNNASN SWMDRQPIEN  240
RHNWSSGGGG GLEFSTANSV DEEMRTGMSS DSNQQGLSLS LSSNPPSNKL PVAQLIGSQD  300
LHASTDDDDD HHHALKDLQN SKMGKSSGGY LCSITKPSII SKACGKSHQD ILGNSSTSAY  360
RSTGPLGPFT GYATILKSSK FLKPAQQLLD EFCRVSDSKI LKTCEASERM SGDVSASASV  420
SISIEAGNAT ETEVVAKRNN SGASSTTFYG STEISSDGGA ASISSESFWP EYQQKKAKLL  480
YMQEEVSRRC KQYHQQMQMV VASFESVAGL NSATPYICMA LNAVSRHFRC LTNSIKDQLK  540
HTRKALGEEY MSSSVTAAGT AGCCSKGEKN FAKLKYMGLG FQKHNKSGGG SLVGFSEPQQ  600
HVWRPQRGLP ERSVAILRTW LFEHFLHPYP TDTDKHMLAT QTGLSRNQVS NWFINARVRV  660
WKPMVEEIHI LETRGGSLET GQDPINKDGN SANEGTSSRP NNDHQLSMNV MPDRQLKCLG  720
DAEQRNQDMK RSRLECQVSS SMDGGLMGFV QDQRGGFEAG GLGAVSLTLG LRHGVESAQQ  780
QQQLQQQEDQ LRRQLGGQMI RDYVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	5e-85	TALE family protein