PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP041332.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 456aa MW: 50563.2 Da PI: 6.5176

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP041332.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.4	9.5e-31	371	429	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ PCP041332.1 371 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGNHNHP 429 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MDKGWGLTLD SDSFGYLLNK PPTAAVKLDH HNNKRSSFFG GERMFPGMEF PVKLGRREEQ 60 DASQPSNDNN RMVVDEVDFF SDRKNKLNTN STDDHHQDSK SNGAVSVKKE NWTGLDVNTG 120 LQLVTANTRS DQSMVDDGIS SDHGVNKTAK NHEIKVEISI FRLMFYSLVG VDYDDQLAQL 180 QVEVQRMNAE NQRLKEMLGQ VTNNYSALQM HLAAVVQQQN HTTAAPADQI SQLDRDQNAE 240 AKSDQEKKQG LVPRQFLNLG PRATAETNDD QVSNCSSEAR TRSASPPQNI DEVVKNDQIG 300 PLDPPNSNNF RDGKRVGGDE SPESESQGWV PNKVPKLNNS AAPKPTDQST EATMRKARVS 360 VRARSEAPMI TDGCQWRKYG QKMAKGNPCP RAYYRCTMAV GCPVRKQVQR CAEDRTILIT 420 TYEGNHNHPL PPAAMAMAST TTAAASMLLS GFDLYD

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MDKGWGLTLD SDSFGYLLNK PPTAAVKLDH HNNKRSSFFG GERMFPGMEF PVKLGRREEQ  60
DASQPSNDNN RMVVDEVDFF SDRKNKLNTN STDDHHQDSK SNGAVSVKKE NWTGLDVNTG  120
LQLVTANTRS DQSMVDDGIS SDHGVNKTAK NHEIKVEISI FRLMFYSLVG VDYDDQLAQL  180
QVEVQRMNAE NQRLKEMLGQ VTNNYSALQM HLAAVVQQQN HTTAAPADQI SQLDRDQNAE  240
AKSDQEKKQG LVPRQFLNLG PRATAETNDD QVSNCSSEAR TRSASPPQNI DEVVKNDQIG  300
PLDPPNSNNF RDGKRVGGDE SPESESQGWV PNKVPKLNNS AAPKPTDQST EATMRKARVS  360
VRARSEAPMI TDGCQWRKYG QKMAKGNPCP RAYYRCTMAV GCPVRKQVQR CAEDRTILIT  420
TYEGNHNHPL PPAAMAMAST TTAAASMLLS GFDLYD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-102	WRKY family protein