PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP034937.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HSF

Protein Properties

Length: 402aa MW: 44809.9 Da PI: 4.9155

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP034937.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.2	1.5e-34	42	133	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k++e++ed++++ ++sws+ nsfvv+d ++f+ ++Lp+yFkhsnf+SF+RQLn+YgF+kv+ ++ weF+++ F g+++ll++ik PCP034937.1 42 FLTKTFEMVEDPSTDAIVSWSKARNSFVVWDYHKFSATLLPRYFKHSNFSSFIRQLNTYGFRKVDPDR---------WEFANEGFLGGQRHLLKTIK 129 9**************************************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+++ PCP034937.1 130 RRRH 133 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MDRVLVKEEE VVTCTVGSSS SSSSSFSPQP IEGLHEVGPP PFLTKTFEMV EDPSTDAIVS 60 WSKARNSFVV WDYHKFSATL LPRYFKHSNF SSFIRQLNTY GFRKVDPDRW EFANEGFLGG 120 QRHLLKTIKR RRHVSQNIQQ EAGGGACVEL GQYGVETELE RLKRDRNILM TEIVKLRQQQ 180 QNSREQVMAM EGRLLTTEKK QQQMMTFLAK ALNNPSFLQN LAEKNAKNRA LHGIGRKRRL 240 AASPSLESLQ EAPRIDVVDY SASQDQGELA TMEPDIENFF STAALDNESS SGFKDPKPSL 300 VTTSTGGGNL DSVDETIWEE LWSDDLIGGN PEEEAAAVGE ESEVDVEVED LVAEPADWEG 360 SGECCKGANS NAAVSLRRRS RRTPVKGFGT FDVASDRRSQ CT

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MDRVLVKEEE VVTCTVGSSS SSSSSFSPQP IEGLHEVGPP PFLTKTFEMV EDPSTDAIVS  60
WSKARNSFVV WDYHKFSATL LPRYFKHSNF SSFIRQLNTY GFRKVDPDRW EFANEGFLGG  120
QRHLLKTIKR RRHVSQNIQQ EAGGGACVEL GQYGVETELE RLKRDRNILM TEIVKLRQQQ  180
QNSREQVMAM EGRLLTTEKK QQQMMTFLAK ALNNPSFLQN LAEKNAKNRA LHGIGRKRRL  240
AASPSLESLQ EAPRIDVVDY SASQDQGELA TMEPDIENFF STAALDNESS SGFKDPKPSL  300
VTTSTGGGNL DSVDETIWEE LWSDDLIGGN PEEEAAAVGE ESEVDVEVED LVAEPADWEG  360
SGECCKGANS NAAVSLRRRS RRTPVKGFGT FDVASDRRSQ CT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	125	131	LKTIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-120	HSF family protein