PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP031780.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | GRAS | ||||||||
Protein Properties | Length: 180aa MW: 20048.3 Da PI: 9.8732 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 133.9 | 1.8e-41 | 3 | 178 | 190 | 374 |
GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adhnsesFlerflealeyysalfdsleaklpreseerikv 285 ++++ ++ gE++aV l+ + r l +++++++ +L ++++sP vvv+v+ e d +++sF + f++ le++s +++sl+a+++ s+ +k+ PCP031780.1 3 SFKAVKFMDGEKTAVLLSPYILRRL----CSQNNISCFLGDMRRVSPSVVVFVNGEgmGDSGTTSFRRNFVSGLEFFSNMLESLDASVAVSSDVVKKI 96 567888999*********9999998....44444667*****************9965566999********************************** PP GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 E +ll+++i+ +v ++g++ Wre ++ aG+++++ls++a qa++ll kv+++g++v +++++lvl+W+dr+Lv++SaWr PCP031780.1 97 ETFLLRPKIQAAVEAAGRR-------IPPWREVFQGAGMRAMELSQFADFQAQCLLGKVQVRGFHVAKRQAELVLCWHDRALVATSAWR 178 *****************98.......99************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
MMSFKAVKFM DGEKTAVLLS PYILRRLCSQ NNISCFLGDM RRVSPSVVVF VNGEGMGDSG 60 TTSFRRNFVS GLEFFSNMLE SLDASVAVSS DVVKKIETFL LRPKIQAAVE AAGRRIPPWR 120 EVFQGAGMRA MELSQFADFQ AQCLLGKVQV RGFHVAKRQA ELVLCWHDRA LVATSAWRCS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36710.1 | 2e-65 | GRAS family protein |