PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP029514.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TCP

Protein Properties

Length: 309aa MW: 32762.4 Da PI: 9.106

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP029514.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	124.8	9.6e-39	63	147	2	86
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnss 86 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i ++tgt++++as+ a+ s+s+++ s PCP029514.1 63 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIMAATGTGTIPASALaAAGGSVSQQG-TS 147 789******************************************************************99854444444433.22 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MDPKGSKQTQ DIPSFLSLPP QPQQQQPPPP QPNSNMNDDK PAEIKDFQIV IADKDESGKK 60 QLAPKRSSNK DRHTKVEGRG RRIRMPALCA ARIFQLTREL GHKSDGETIQ WLLQQAEPSI 120 MAATGTGTIP ASALAAAGGS VSQQGTSLSA GLHQKIDELG GSSGGRTSWA MVGGNLGRPH 180 VAGVGGLWPP VSSFGFQSSS GPPSATTNLG SESSNYLQKI GFPGFDLPVS NNGPMSFTSI 240 LGGGNQQQQQ LPGLELGLSQ DGHIGVLNSQ ALSQIYQQMG HARVHQQPPQ HHHHHQQPPS 300 KDDSQGSGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	8e-62	TCP family protein