PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP029392.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 1180aa MW: 133024 Da PI: 6.62

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP029392.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.6	1.4e-33	536	590	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe+Fveav+qLGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+ PCP029392.1 536 KARMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 590 68****************************************************8 PP
2	Myb_DNA-binding	55.4	1.4e-17	538	589	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+qlGg t+k + + m +g+t +++ks++qky+ PCP029392.1 538 RMRWTPELHEAFVEAVNQLGGSeraTPKGVLKLMKvEGLTIYHVKSHLQKYR 589 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1180 aa Download sequence
MAKLVGFLVF FIALAVAAAD WNILKTRKTD NVELGDELKK YCESWRINVE VNNIRGFEVV 60 PQECVWYVNK YMTSSQYKAD SQKALEEVTL YLSSCCKLEG DGKDAWIFDV DDTLLSTIPY 120 FKTHGFGGEK PNGTCLEAWM REGKAPALEH TLKLFHEIKD RGIKIFLISS RRENLRSSSV 180 DNLIRVGYHG WTGLILRGLE DEFKEVQKYK SDARRRLIDE GYRIWGIIGD QWSSFEGHPM 240 AKRTFKLPNS MRKLMTPFSG FAVNNKQKME ARPAMSIRTS AAKQLTHMGV SAAMSSSLPV 300 LPTSLEETYP KLPDSQQVSM ERELMTRPVG HAGHLTSNSG VVGHLYSSSS GFSTDLHYSA 360 LSPHERQSKN SPFISQSSAA LPFPHSPHSG FLQSTESCPY PKENSGSWCT DSLPGFLHFP 420 VNSHVENSQI ESSSCTGIMT ADEFVKRNDW QDWADQLITD DDALTSNWNE LLDDNNVTDL 480 EQKMKYQAPQ PSSTFSAEQS QVHQQQPASS GEIIPAPSRE IISVPATSSA NSASAKARMR 540 WTPELHEAFV EAVNQLGGSE RATPKGVLKL MKVEGLTIYH VKSHLQKYRT ARYIPESSEG 600 ASEKKLTSIE EMTSLDLKTG IEITEALRLQ MEVQKRLHEQ LEIQRNLQLR IEEQGKYLQM 660 MFEKQCKSGI DTLKPSSSNL DDPSAQPSDA MQVCPDKSEL DSSKLDQGET ETDPVKANSA 720 SSGGSQEPEG KQKSPEAEAL SENPEPDGGV SSPQPPKLGG NDFEGDKNVL SNAEWKERAY 780 KCKFRQEKSD LVRKDGGNDD QRLEDDLLFV ESQEPLWRNL AKWNPIDRET YLERLSIRFE 840 REAVGYPVDK ICCYVSDDGA SMLLFDVLSE TAEFARRWVP FCKKHNIEPR APEFYFCQKI 900 DYLKDKVHPN FVKERSGMKG EYEEFQVRID ALISKAQKKP EEGWVMQGGT PWPGNSTSDH 960 PGMIQVYLGS GTGARDVDCE ELPRLVSVYN LQMLVWDQQI GWIYGSVTED TLTGLKMHSR 1020 GWKSVYCMPE RPAFKGSAPI NLSDRLHQVL RWALGSVEIF LSRHCPLWYA YGGKLKWMER 1080 LAYINTIVYP FTSIPLVAYC TVPAVCLLTG KFIVPTLNNY ASIWVMGLCP LHHYNRHCRA 1140 QMVQCQHQGL VAKRAVLGTW RSVSTSFLRI PRLPQSPGRS

Sequence ? help Back to Top

Protein Sequence Length: 1180 aa Download sequence

MAKLVGFLVF FIALAVAAAD WNILKTRKTD NVELGDELKK YCESWRINVE VNNIRGFEVV  60
PQECVWYVNK YMTSSQYKAD SQKALEEVTL YLSSCCKLEG DGKDAWIFDV DDTLLSTIPY  120
FKTHGFGGEK PNGTCLEAWM REGKAPALEH TLKLFHEIKD RGIKIFLISS RRENLRSSSV  180
DNLIRVGYHG WTGLILRGLE DEFKEVQKYK SDARRRLIDE GYRIWGIIGD QWSSFEGHPM  240
AKRTFKLPNS MRKLMTPFSG FAVNNKQKME ARPAMSIRTS AAKQLTHMGV SAAMSSSLPV  300
LPTSLEETYP KLPDSQQVSM ERELMTRPVG HAGHLTSNSG VVGHLYSSSS GFSTDLHYSA  360
LSPHERQSKN SPFISQSSAA LPFPHSPHSG FLQSTESCPY PKENSGSWCT DSLPGFLHFP  420
VNSHVENSQI ESSSCTGIMT ADEFVKRNDW QDWADQLITD DDALTSNWNE LLDDNNVTDL  480
EQKMKYQAPQ PSSTFSAEQS QVHQQQPASS GEIIPAPSRE IISVPATSSA NSASAKARMR  540
WTPELHEAFV EAVNQLGGSE RATPKGVLKL MKVEGLTIYH VKSHLQKYRT ARYIPESSEG  600
ASEKKLTSIE EMTSLDLKTG IEITEALRLQ MEVQKRLHEQ LEIQRNLQLR IEEQGKYLQM  660
MFEKQCKSGI DTLKPSSSNL DDPSAQPSDA MQVCPDKSEL DSSKLDQGET ETDPVKANSA  720
SSGGSQEPEG KQKSPEAEAL SENPEPDGGV SSPQPPKLGG NDFEGDKNVL SNAEWKERAY  780
KCKFRQEKSD LVRKDGGNDD QRLEDDLLFV ESQEPLWRNL AKWNPIDRET YLERLSIRFE  840
REAVGYPVDK ICCYVSDDGA SMLLFDVLSE TAEFARRWVP FCKKHNIEPR APEFYFCQKI  900
DYLKDKVHPN FVKERSGMKG EYEEFQVRID ALISKAQKKP EEGWVMQGGT PWPGNSTSDH  960
PGMIQVYLGS GTGARDVDCE ELPRLVSVYN LQMLVWDQQI GWIYGSVTED TLTGLKMHSR  1020
GWKSVYCMPE RPAFKGSAPI NLSDRLHQVL RWALGSVEIF LSRHCPLWYA YGGKLKWMER  1080
LAYINTIVYP FTSIPLVAYC TVPAVCLLTG KFIVPTLNNY ASIWVMGLCP LHHYNRHCRA  1140
QMVQCQHQGL VAKRAVLGTW RSVSTSFLRI PRLPQSPGRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	1e-102	G2-like family protein