PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP029275.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 348aa    MW: 37815.9 Da    PI: 8.1492
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP029275.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.69.4e-32170228259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+ver+++dp+++++tY+geHnh+
  PCP029275.1 170 SDVWAWRKYGQKPIKGSPYPRGYYRCSSSkGCMARKQVERNRSDPNMFIVTYTGEHNHP 228
                  79*************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MEDDWDLQAV VRGCSTATAT TTTSSTRTPS TAATASFNIS GFHSNPAAAS FSSFGPTSPQ  60
QQLLFSPPLP DPIIKPRNAI EELHELYKPF FPKSQPSLSS PQIAPPTLSP LTTPKDPRHP  120
IQYHQQTQHQ HQQQQTQHSK PSSSTTTVRS KKRKNQLKKV CQVPAEGLSS DVWAWRKYGQ  180
KPIKGSPYPR GYYRCSSSKG CMARKQVERN RSDPNMFIVT YTGEHNHPAP THRNSLAGST  240
RQKPFSPQTA TRGDSAKPAS PTTSVSADEE TVVAPQSTTV ESNCKEEKGS PLITDEEDEL  300
LGMCDSVVSD DFFVGLDGLA GDYFSDHSTG SFGMPWISSS AATAAGSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.15e-72WRKY family protein