PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP028341.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 800aa MW: 87940 Da PI: 7.4391

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP028341.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.5e-09	617	654	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gL+ +qV++WF N R + PCP028341.1 617 FEHflHPYPTDTDKHMLATQTGLSRNQVSNWFINARVR 654 664459******************************87 PP
2	BELL	102.8	2.4e-33	466	534	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 + q+kkakLl ++eeV +rYkqy++q+q+v++sFe vagl sa+pY+s+Al++++rhFrcL + i++q+ PCP028341.1 466 KYQQKKAKLLYMQEEVSRRYKQYHQQMQMVVASFESVAGLSSATPYISMALNTVARHFRCLTNSIKDQL 534 689***************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 800 aa Download sequence
MEMSGFRQES HVAQQSRRDK LRVHQTSSPS HHLDNLPNNS GKLPLHPGLN PDIVQVRNVR 60 NANLLYDPTM FSSEMLNFSI NANVPLSAHR DTMACHDQDL GAAQPASESQ NFGNWRSTLN 120 QPQSLDWVNT YTSGYRDVVQ SSLANPSADQ ISIHHVAQEH LGGGTMHFSS PSLNYVNTLQ 180 DVVTSASQGR QQDQLEMAST VHQRFIENEL VRVPSYSNPP NTLRFNNGSN SWMDRQPIEN 240 CHRSSGGGLE FSIAKSVDEE LRTGMSSDSN QQGLSLSLSS NPPSNKLPVA QLIGSQDLHV 300 STDDHDDHAL KDLQNSKMGK SSGGYLCSIT KPSVISKACG KSLQDIVGTS NTSVYRNTGP 360 LGPFTGYATI LKSSKFLKPA QQLLDEFCRV SDSKLLKTSE ASERMSGDVI ASASVSICTE 420 AVSAIETEVV AKRNNSGASF STFYGSNEIN SDGGAASISS ESFRPKYQQK KAKLLYMQEE 480 VSRRYKQYHQ QMQMVVASFE SVAGLSSATP YISMALNTVA RHFRCLTNSI KDQLKHIRKA 540 LGEENMSSAV TAAVTAGCSS KGEKNLAKLK YMGLGFQKHT SSGGGSLVGF SEPQQHVWRP 600 QRGLPERSVA ILRAWLFEHF LHPYPTDTDK HMLATQTGLS RNQVSNWFIN ARVRVWKPMV 660 EEIHMLETRG GSHEAGQDPI NKDGNSANEG TSSRPNNDHQ LSMNMMPDRQ LECSGDAEQQ 720 NQEMKRSRLE CQVPSSMDGG LMGFVPYQRG GFEAGGLGAV SLTLGLRHGV ESAQQQQQLQ 780 QQEDQLRRQL GGQVVRDYVG

Sequence ? help Back to Top

Protein Sequence Length: 800 aa Download sequence

MEMSGFRQES HVAQQSRRDK LRVHQTSSPS HHLDNLPNNS GKLPLHPGLN PDIVQVRNVR  60
NANLLYDPTM FSSEMLNFSI NANVPLSAHR DTMACHDQDL GAAQPASESQ NFGNWRSTLN  120
QPQSLDWVNT YTSGYRDVVQ SSLANPSADQ ISIHHVAQEH LGGGTMHFSS PSLNYVNTLQ  180
DVVTSASQGR QQDQLEMAST VHQRFIENEL VRVPSYSNPP NTLRFNNGSN SWMDRQPIEN  240
CHRSSGGGLE FSIAKSVDEE LRTGMSSDSN QQGLSLSLSS NPPSNKLPVA QLIGSQDLHV  300
STDDHDDHAL KDLQNSKMGK SSGGYLCSIT KPSVISKACG KSLQDIVGTS NTSVYRNTGP  360
LGPFTGYATI LKSSKFLKPA QQLLDEFCRV SDSKLLKTSE ASERMSGDVI ASASVSICTE  420
AVSAIETEVV AKRNNSGASF STFYGSNEIN SDGGAASISS ESFRPKYQQK KAKLLYMQEE  480
VSRRYKQYHQ QMQMVVASFE SVAGLSSATP YISMALNTVA RHFRCLTNSI KDQLKHIRKA  540
LGEENMSSAV TAAVTAGCSS KGEKNLAKLK YMGLGFQKHT SSGGGSLVGF SEPQQHVWRP  600
QRGLPERSVA ILRAWLFEHF LHPYPTDTDK HMLATQTGLS RNQVSNWFIN ARVRVWKPMV  660
EEIHMLETRG GSHEAGQDPI NKDGNSANEG TSSRPNNDHQ LSMNMMPDRQ LECSGDAEQQ  720
NQEMKRSRLE CQVPSSMDGG LMGFVPYQRG GFEAGGLGAV SLTLGLRHGV ESAQQQQQLQ  780
QQEDQLRRQL GGQVVRDYVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	8e-90	TALE family protein