PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP027517.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HSF

Protein Properties

Length: 482aa MW: 53617 Da PI: 4.8049

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP027517.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.1	3.8e-35	143	234	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k++++++d+e+++++sws++ +sf+v+d ef++++LpkyFkh+n++SF+RQLn+YgFkkv+ ++ weF+++ F+ gkk+ll++ik PCP027517.1 143 FLNKTFQMVDDPETDSVVSWSDTRQSFIVWDLYEFSRTLLPKYFKHNNISSFIRQLNTYGFKKVDPDR---------WEFANEGFQGGKKHLLKNIK 230 9**************************************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+++ PCP027517.1 231 RRRR 234 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MVVPDGGGSS GGGDGDGTPS RPLSSKTQFP KTSNGLKQAE NELDQVKEEV TELKKGIKTL 60 TSSKGGNFDL SSSSSSSAAP PNRAAELLHV KEETVDVVVV EDDDFDGGGH FNTINGCGGD 120 FGSSSMELPK PMEGLREVGP PPFLNKTFQM VDDPETDSVV SWSDTRQSFI VWDLYEFSRT 180 LLPKYFKHNN ISSFIRQLNT YGFKKVDPDR WEFANEGFQG GKKHLLKNIK RRRRYNKKPT 240 PVAAHSTKAR LEAEIESLKK DQDFLRLEIL NLRQQQKHSQ HQLTAVEQQI RSSVCKQQSM 300 LFFLTKTTMN PTFVQQLMLK RVIKRELDGG DLGKRRRLSP AQDIESFDEW INASLRFDCR 360 GQIEEELVPM QSALAEQISE GIASKQNETP LSSPIVDKSC NAGQDLNPSV MAGTSSSEDV 420 PSAYDDMSDK FLEEYIVFDD ECALNDSSLY QELEDLIVKP CDWSAYVSNS LVEQAGCIGS 480 VP

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MVVPDGGGSS GGGDGDGTPS RPLSSKTQFP KTSNGLKQAE NELDQVKEEV TELKKGIKTL  60
TSSKGGNFDL SSSSSSSAAP PNRAAELLHV KEETVDVVVV EDDDFDGGGH FNTINGCGGD  120
FGSSSMELPK PMEGLREVGP PPFLNKTFQM VDDPETDSVV SWSDTRQSFI VWDLYEFSRT  180
LLPKYFKHNN ISSFIRQLNT YGFKKVDPDR WEFANEGFQG GKKHLLKNIK RRRRYNKKPT  240
PVAAHSTKAR LEAEIESLKK DQDFLRLEIL NLRQQQKHSQ HQLTAVEQQI RSSVCKQQSM  300
LFFLTKTTMN PTFVQQLMLK RVIKRELDGG DLGKRRRLSP AQDIESFDEW INASLRFDCR  360
GQIEEELVPM QSALAEQISE GIASKQNETP LSSPIVDKSC NAGQDLNPSV MAGTSSSEDV  420
PSAYDDMSDK FLEEYIVFDD ECALNDSSLY QELEDLIVKP CDWSAYVSNS LVEQAGCIGS  480
VP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	226	232	LKNIKRR
2	334	338	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	7e-76	HSF family protein