PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP026526.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 311aa    MW: 34958.4 Da    PI: 5.1382
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP026526.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.41.9e-16241051094
                  HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
           B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                  +  +  l +p++f+++++++  e   ltl+d+   sW+vk+  r + g++ +t+GW+eF ++n L  g fvvF +dgr++f+ +v
  PCP026526.1  24 N--TEYLHIPRDFLKHIQKDLSERAFLTLTDSLDCSWSVKV-SRTTMGAVRFTDGWQEFLRDNSLGHGNFVVFIYDGRMKFSIRV 105
                  3..34599******888666667778***************.3666666*****************************9996555 PP
2B351.81.5e-162263071298
                  HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
           B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                  +s+++++p  f ++h +k ++++++ +++ + ++W v++ + ++s  + +++GW++F+++n++  gD+++F+l +  + e++v+++ 
  PCP026526.1 226 TSSNVYVPAAFSRKHFSK-QKQFKIFMKNAEEKTWGVNVVHLNTS--HSFSAGWSRFASSNQIGIGDTCIFELLS--SNEMKVRIIH 307
                  456799*********655.4779****************777777..669**********************875..5667888865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MVKNISTNDE KKPSFFRILV AGYNTEYLHI PRDFLKHIQK DLSERAFLTL TDSLDCSWSV  60
KVSRTTMGAV RFTDGWQEFL RDNSLGHGNF VVFIYDGRMK FSIRVYGTNA CEREVGSTKI  120
GSTNQNSTFA DTTKMPSGSG GQRKCDGSSS KRPHPSSSCS NDDSGENLCE PEEDDEDSTS  180
NDWDDDEDNT SDEDSEDDTS EEDMEAAAEP ESFKSKFPHF KSVIRTSSNV YVPAAFSRKH  240
FSKQKQFKIF MKNAEEKTWG VNVVHLNTSH SFSAGWSRFA SSNQIGIGDT CIFELLSSNE  300
MKVRIIHKAS V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.11e-17B3 family protein