PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP024989.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 144aa    MW: 16632.9 Da    PI: 8.8605
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP024989.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.22.9e-056890123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 + C +Cgk F  + + ++H +++
  PCP024989.1 68 FMCRKCGKAFAVRGDWRTHEKNC 90
                 89*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MHMWGHGSQY RKGPESLRGT QPTAMLRLPC YCCAPGCRNN IEHPRAKPLK DFRTLQTHYK  60
RKHGIKPFMC RKCGKAFAVR GDWRTHEKNC GKLWYCTCGS DFKHKRSLKD HIKAFGQGHA  120
AYGIDCFEEE DDAASEIEEN DSFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.12e-89C2H2 family protein