PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP022074.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

C2H2

Protein Properties

Length: 365aa MW: 41776.2 Da PI: 7.2499

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP022074.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.5	2.5e-05	204	223	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ PCP022074.1 204 FSCPVCYKTFNRYNNMQMHM 223 89*****************9 PP
2	zf-C2H2	14.5	0.00011	288	310	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ PCP022074.1 288 FMCRKCGKAFAVRGDWRTHEKNC 310 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MADYPYSSNF FPGLFKFNPL HRHHEHEPPP SNPQPPPHAS QSSPSYAHNF FLNQNHSFYF 60 PTHQQILNTR PPSPPLREAL PLLSRLNPTN QHQHHRDHED QQQHHHEDHQ HFKDQQDEED 120 GDGEDDASVT LHIGLPNPSA AEMASVLSVA ANSSSSEMSN NSTHHEKSDH GDHDSAGYPM 180 SCRLNKGQYW IPTPSQILIG PTQFSCPVCY KTFNRYNNMQ MHMWGHGSQY RKGPESLRGT 240 QPTGMLRLPC YCCTPGCRNN IDHPRAKPLK DFRTLQTHYK RKHGIKPFMC RKCGKAFAVR 300 GDWRTHEKNC GKLWYCICGS DFKHKRSLKD HIKAFGNGHA AYGIDGFEEE DEPASEVEQD 360 NESMQ

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MADYPYSSNF FPGLFKFNPL HRHHEHEPPP SNPQPPPHAS QSSPSYAHNF FLNQNHSFYF  60
PTHQQILNTR PPSPPLREAL PLLSRLNPTN QHQHHRDHED QQQHHHEDHQ HFKDQQDEED  120
GDGEDDASVT LHIGLPNPSA AEMASVLSVA ANSSSSEMSN NSTHHEKSDH GDHDSAGYPM  180
SCRLNKGQYW IPTPSQILIG PTQFSCPVCY KTFNRYNNMQ MHMWGHGSQY RKGPESLRGT  240
QPTGMLRLPC YCCTPGCRNN IDHPRAKPLK DFRTLQTHYK RKHGIKPFMC RKCGKAFAVR  300
GDWRTHEKNC GKLWYCICGS DFKHKRSLKD HIKAFGNGHA AYGIDGFEEE DEPASEVEQD  360
NESMQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-138	C2H2 family protein