PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP020501.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 348aa    MW: 37866.9 Da    PI: 7.2495
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP020501.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY986.1e-31170228259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+ver+++dp+++++tY+ eHnh+
  PCP020501.1 170 SDIWAWRKYGQKPIKGSPYPRGYYRCSSSkGCMARKQVERNKSDPNIFIVTYTAEHNHP 228
                  79*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MEDDWDLQAV VRGCFTATTT SNTTTTSTRA SSTAATTSLN ISGFHSNPAA ASFSSFDQTS  60
QQQQLLFSLP LSDPIIKPKS AIEELHDLYR PFYPKSQPPL SSPQITPPTL SPLTSLSSLT  120
TPKDQTHPIQ YHRQQQTQHS KPSSSTTARS KKRKNQLKKV CQVPAEGLSS DIWAWRKYGQ  180
KPIKGSPYPR GYYRCSSSKG CMARKQVERN KSDPNIFIVT YTAEHNHPAP THRNSLAGST  240
RQKPLSPQKT TGGDSAKPTS PTTSASVDEE PVVADRSTTV ESSCKEEKGS PLITDEEDEL  300
LGICDSVVSD DFFEGLDGLA EDYFSDHSPV SFGMPWISSS AATAAGSI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1148156ARSKKRKNQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.12e-64WRKY family protein