PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP019842.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Protein Properties

Length: 848aa MW: 93898.6 Da PI: 6.2801

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP019842.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	53	6.3e-17	32	122	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ffk++ s+ l lp kfa + ++ +k+ +led++gr+W+v++ ++ +g+ +++GW+ F+ +n+L++g+f++F ++ +s f vk++ PCP019842.1 32 FFKIM--IGDQLSKVLFLPPKFAPTVsALV---NKKAVLEDSRGRQWKVTI--SRVDGSLAFQQGWNAFALDNDLQVGEFLIFNYVTDSHF--DVKIY 120 56666..3334445699****9996555...458***********..*******************************99999..99999 PP -S CS B3 98 rk 99 +k PCP019842.1 121 DK 122 87 PP

Sequence ? help Back to Top
Protein Sequence Length: 848 aa Download sequence
MGSKLEACAE CTLNCLQDHG NKKKASTVVA SFFKIMIGDQ LSKVLFLPPK FAPTVSALVN 60 KKAVLEDSRG RQWKVTISRV DGSLAFQQGW NAFALDNDLQ VGEFLIFNYV TDSHFDVKIY 120 DKSGCEKLKF SEAMNQKKWT WDNQNSSVKD GPCHTVDNSL MDKQGSSTSL MSDADEDIGQ 180 DLDPMNAKRK APMVMGNASK CDNSHERSKL KLKEPDRDIG QHLYDMNSKR KAPMVMGNAS 240 NRDNSHERSK LKRKKPDGDV GQDLYGMNAK TKAPVVTGNA SNCDNSHERS KLKLKEPDGD 300 IGQHVYGMNA KRKAPVVTRN ASCDNSHERS KYKLKEPDGD ISQDLYGMNA KTKAPVVTKN 360 ASNCDNSHKR SKLKLKESDG DIDQHLYDMN DKGECTIATE NASNYDDSNE MPKLKPKEEY 420 IEDMICMIDR ELGDKQEDNR SCIYDSLNFE LFELKSGTGG SNEVVVWDET CSHHDDSSVR 480 LRNEAGSVDK NPVAKEAVAA AFPMDETYSP HDDSSLRLRN KAGSVDKSPV AKEAVTAAIP 540 MDETCSCHDD SSLRLRGDAS LVDKAPVARE AVTIAIPLDA YKFDGTEKNN SSEARVKKVS 600 PSGDDSRTTN KTSHHLFPTA AVNPNDTGSI SVNNIIELLN ADGSGNKVAA SKKEHDLIDD 660 SFQRAKENFT GTPLESFDMM MKAVKKESVD LTSDPCFQKI IPEIDGKSFE PVDAVCSQIS 720 NMIKREKDIA FPVPVVKSEP VDQVETFPSS SFSCLVAVGS QSFLELPVRL PIRMTIRGRH 780 TPDRRVIFLR DTTMRLWPVL YIDNCFSKIL SSGWEAFSKA NNIQPGDTCA IGIEDASERI 840 CSVHIIRT

Sequence ? help Back to Top

Protein Sequence Length: 848 aa Download sequence

MGSKLEACAE CTLNCLQDHG NKKKASTVVA SFFKIMIGDQ LSKVLFLPPK FAPTVSALVN  60
KKAVLEDSRG RQWKVTISRV DGSLAFQQGW NAFALDNDLQ VGEFLIFNYV TDSHFDVKIY  120
DKSGCEKLKF SEAMNQKKWT WDNQNSSVKD GPCHTVDNSL MDKQGSSTSL MSDADEDIGQ  180
DLDPMNAKRK APMVMGNASK CDNSHERSKL KLKEPDRDIG QHLYDMNSKR KAPMVMGNAS  240
NRDNSHERSK LKRKKPDGDV GQDLYGMNAK TKAPVVTGNA SNCDNSHERS KLKLKEPDGD  300
IGQHVYGMNA KRKAPVVTRN ASCDNSHERS KYKLKEPDGD ISQDLYGMNA KTKAPVVTKN  360
ASNCDNSHKR SKLKLKESDG DIDQHLYDMN DKGECTIATE NASNYDDSNE MPKLKPKEEY  420
IEDMICMIDR ELGDKQEDNR SCIYDSLNFE LFELKSGTGG SNEVVVWDET CSHHDDSSVR  480
LRNEAGSVDK NPVAKEAVAA AFPMDETYSP HDDSSLRLRN KAGSVDKSPV AKEAVTAAIP  540
MDETCSCHDD SSLRLRGDAS LVDKAPVARE AVTIAIPLDA YKFDGTEKNN SSEARVKKVS  600
PSGDDSRTTN KTSHHLFPTA AVNPNDTGSI SVNNIIELLN ADGSGNKVAA SKKEHDLIDD  660
SFQRAKENFT GTPLESFDMM MKAVKKESVD LTSDPCFQKI IPEIDGKSFE PVDAVCSQIS  720
NMIKREKDIA FPVPVVKSEP VDQVETFPSS SFSCLVAVGS QSFLELPVRL PIRMTIRGRH  780
TPDRRVIFLR DTTMRLWPVL YIDNCFSKIL SSGWEAFSKA NNIQPGDTCA IGIEDASERI  840
CSVHIIRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	3e-14	B3 family protein