PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP018824.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 386aa MW: 43702.8 Da PI: 6.6701 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.8 | 8e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ ++++ G+g +W + ++++g++R++k+c++rw++yl PCP018824.1 14 KGPWSPEEDARLKAYIEENGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 33.7 | 8.4e-11 | 70 | 111 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++ Ed ++ + G++ W+ Ia+ ++ gRt++++k++w++ PCP018824.1 70 GFSEKEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 699*****************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 386 aa Download sequence |
MGRAPCCDKA NVKKGPWSPE EDARLKAYIE ENGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEKEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGM 120 RKQSNINRSP SDQSQDHQLK DADDAQALSS SALERLQLHM QLQSLQNPFS FYNHPALWPK 180 LHPLQEKMIQ TLRSMNDNNP MMHHHTLTTP LQPAQGQKGN INDVYEQVER TSASILIQEE 240 YAKLCNQKSM DELENPLNGM SSSDTRYHAC ISTSNQVDST IVAAKADNVE QLNSVGTHGP 300 HHQVNLSFHG EFGDTDNNKC VGFTAQQEHD QMAEFDCFKE MNVSKDSLVW WANEFDAKSA 360 SSDSWDSTSI LHSQGVFQDY ELGYNM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 7e-98 | MYB family protein |