PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP016357.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | C2H2 | ||||||||
Protein Properties | Length: 261aa MW: 29376.9 Da PI: 7.5003 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.3 | 5.6e-05 | 100 | 119 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ PCP016357.1 100 FSCPLCFKTFNRYNNMQMHM 119 89*****************9 PP | |||||||
2 | zf-C2H2 | 15.1 | 6.8e-05 | 184 | 206 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ PCP016357.1 184 FMCRKCGKAFAVRGDWRTHEKNC 206 89*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MQESAAADDH QSFLSSSRSD DIVDHQEEDD ETVTVALHLG LPSRTLSSAD LISRLSSPEI 60 SSDKEADVTV ASAGFASNRL NKGQYWIPTP AQILIGPTQF SCPLCFKTFN RYNNMQMHMW 120 GHGSQYRKGP ESLRGTQPTA MLRLPCYCCA PGCRNNIDHP RAKPLKDFRT LQTHYKRKHG 180 IKPFMCRKCG KAFAVRGDWR THEKNCGKLW YCTCGSDFKH KRSLKDHIKA FGQGHAAYGI 240 DCFEEEDDVA SEIEENDSSS H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57670.1 | 1e-126 | C2H2 family protein |