PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP016141.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | HSF | ||||||||
Protein Properties | Length: 880aa MW: 98961.5 Da PI: 6.6366 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 108.6 | 4.8e-34 | 42 | 133 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k++e++ed++++ ++sws+ nsfvv+d ++f+ ++Lp+yFkhsnf+SF+RQLn+YgF+kv+ ++ weF+++ F g+++ll++ik PCP016141.1 42 FLTKTFEMVEDPSTDAIVSWSKARNSFVVWDYHKFSATLLPRYFKHSNFSSFIRQLNTYGFRKVDPDR---------WEFANEGFLGGQRHLLKTIK 129 9****************************************************************999.........******************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+++ PCP016141.1 130 RRRH 133 *975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 880 aa Download sequence |
MDRVLVKEEE VVTCTVGSSS SSSSSFSPQP IEGLHEVGPP PFLTKTFEMV EDPSTDAIVS 60 WSKARNSFVV WDYHKFSATL LPRYFKHSNF SSFIRQLNTY GFRKVDPDRW EFANEGFLGG 120 QRHLLKTIKR RRHVSQNIQQ EAGGGACVEL GQYGVETELE RLKRDRNILM TEIVKLRQQQ 180 QNSREQVMAM EGRLLTTEKK QQQMMTFLAK ALNNPSFLQN LAEKNAKNRA LHGIGRKRRL 240 AASPSLESLQ EAPRIDVVDY SASQDQGELA TMEPDIENFF STAALDNESS SGFKDPKPSL 300 VTTSTGGGNL DSVDETIWEE LWSDDLIGGN PEEEAAAVGE ESEVDVEVED LVAEPADWEG 360 SGECCKGANS NAAVSLRRRS RRTPVKGFGS DFSYFRQGNQ VADCLANYGV DHPGVHWFHM 420 GRQPLIIVAD AELCREVGIK KFKDIPNRSI PAPISASPLH QKGLFFTRDA RWSTMRNTIL 480 SVYQPSHLAS LVPTMQSFIE SATEKLHSSK EEEITFSTLS LGLATDVLGQ AAFGVNFGLS 540 NTHSIGKSIK KIDGEDNDDE VSDFINQHIY STTQLKMDFS GSLSIILGLL VPILQEPFRQ 600 ILKRIPGTMD WKVERTNRKL SGRVDDIVAK RMKDRERGSK DFLSVIMNAM ESEAVSKNFF 660 TPDYISAVTY EHLLAGSATT AFTLSSIVYL VAGHPEVEKK LLAEIDGFGP PDQMPTAHDL 720 QHKPICQWIL VYLSVFQMQV IKEAMRFYMV SPLVARETSR DVEIGGYLLP KGTWVWLALG 780 VLAKDPKNFP EPDKFRPERF DPNCQELKQR HPYAFIPFGI GPRSCIGQKF ALQELKLSLI 840 HLYRKYVFRH SPDMEKPLEL EYGIVLNFKN GVKLRVIRRT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 125 | 131 | LKTIKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26150.1 | 1e-113 | HSF family protein |