PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP014755.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 623aa MW: 67876.3 Da PI: 7.0525

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP014755.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.9	1.3e-30	367	425	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ PCP014755.1 367 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGNHNHP 425 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 623 aa Download sequence
MAKGSGLSID SDPFSFSLHN PIVLNSFQED QYNHHLPPLS TTRKQLHHHH SSLMLMDNST 60 AIRRRSPTPP PPTTIQFAVN LNRSNDDDVQ HSPDSPPPSN EQRKVINERD FFADSKNHLE 120 KSVGSDYPAD KMDLHGPTDM EFNVNTGLNL LLTNTSSDHS VAEDGIPSNI EDKRAKSELA 180 VLQAELQRIN VENQRLRGML NQVTTNYNAL QVQLLNLMQS QKADQNSSGA EGHRVAVEEK 240 KLMNGNGSSL VVPRQFMDLG LAAKNGDADE HSQSSSDERS RGERSGSLGD NVKAAGHSDD 300 QGIGFDHEKK DFGRRIGREE SPDQPSQSWG PNKVPRLSSP KEVDQTEATM RKARVSVRAR 360 SEAPMITDGC QWRKYGQKMA KGNPCPRAYY RCTMAAGCPV RKQVQRCAED RTILITTYEG 420 NHNHPLPPAA MAMASTTSSA ARMLLSGAMP SADSVMDSNF LSRTILPYST SMATISASAP 480 FPTVTLDLTQ SPNPLQQFQR PPGQFNIPFP NPNQNFTSGP SSLLPQIFSQ ALYNQSKFSG 540 LQMSQDTDRA AVQLGHQSQP GQQQGSLADL TAVTAAIAAD PNFTAALAAA ITSIIGNAHP 600 NNNVANPATN SNNNNANATK QQQ

Sequence ? help Back to Top

Protein Sequence Length: 623 aa Download sequence

MAKGSGLSID SDPFSFSLHN PIVLNSFQED QYNHHLPPLS TTRKQLHHHH SSLMLMDNST  60
AIRRRSPTPP PPTTIQFAVN LNRSNDDDVQ HSPDSPPPSN EQRKVINERD FFADSKNHLE  120
KSVGSDYPAD KMDLHGPTDM EFNVNTGLNL LLTNTSSDHS VAEDGIPSNI EDKRAKSELA  180
VLQAELQRIN VENQRLRGML NQVTTNYNAL QVQLLNLMQS QKADQNSSGA EGHRVAVEEK  240
KLMNGNGSSL VVPRQFMDLG LAAKNGDADE HSQSSSDERS RGERSGSLGD NVKAAGHSDD  300
QGIGFDHEKK DFGRRIGREE SPDQPSQSWG PNKVPRLSSP KEVDQTEATM RKARVSVRAR  360
SEAPMITDGC QWRKYGQKMA KGNPCPRAYY RCTMAAGCPV RKQVQRCAED RTILITTYEG  420
NHNHPLPPAA MAMASTTSSA ARMLLSGAMP SADSVMDSNF LSRTILPYST SMATISASAP  480
FPTVTLDLTQ SPNPLQQFQR PPGQFNIPFP NPNQNFTSGP SSLLPQIFSQ ALYNQSKFSG  540
LQMSQDTDRA AVQLGHQSQP GQQQGSLADL TAVTAAIAAD PNFTAALAAA ITSIIGNAHP  600
NNNVANPATN SNNNNANATK QQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-107	WRKY family protein