PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP014664.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 122aa    MW: 14168.2 Da    PI: 8.816
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP014664.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2171.6e-054466123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 + C +Cgk F  k + ++H +++
  PCP014664.1 44 FMCRKCGKAFAVKGDWRTHEKNC 66
                 89*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MLRLPCYCCT PGCRNNIDHP RAKPLKDFRT LQTHYKRKHG IKPFMCRKCG KAFAVKGDWR  60
THEKNCGKLW YCICGSDFKH KRSLKDHIKA FGNGHAAYGF NGFEEEDEPA SEVEQDNESM  120
QQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.17e-83C2H2 family protein