PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP014140.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Protein Properties

Length: 346aa MW: 39756.2 Da PI: 9.7734

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP014140.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	50.7	3.2e-16	17	100	11	99
HHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 11 lksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +s+ l++p f++++ +g + + l+ ++g + +v+l + + ++ ++ +GW++Fvk++ L++gDf+vF++dg s+f +vk++++ PCP014140.1 17 DTSQSLRVPPAFITKNfNGRS--LCKCDLKGPTGIRRTVEL--EERENGLFFHDGWQGFVKDHLLEAGDFLVFSYDGVSKF--NVKIYDR 100 455669********75554..4489**********..*******************************99999..9999987 PP
2	B3	40.7	4.3e-13	198	284	11	99
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +++ ++++pk+ a + g+ + +tl+d++grsW v+l+ ++ l++GW+e kan++ gD++vF+++++s v++frk PCP014140.1 198 NRLYNVRIPKQLAFDEGLMDKD--SVTLQDPDGRSWFVRLRTLYADRFdyLNLSTGWRECGKANQISLGDTIVFEFVKQSVI--QVHIFRK 284 4555689**99766655444..6***********87545444557799*******************9875555..9999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MARKPKKPSF IKILAGDTSQ SLRVPPAFIT KNFNGRSLCK CDLKGPTGIR RTVELEEREN 60 GLFFHDGWQG FVKDHLLEAG DFLVFSYDGV SKFNVKIYDR SACEKDVEVA KMNEGNQARR 120 KVEVVDIDTE NVKAEVVDID TVNYNQDREK QMIFSSRSCD HLKSRKRPVS NYVEDTSTAS 180 ILLETENPCF LHFLNHRNRL YNVRIPKQLA FDEGLMDKDS VTLQDPDGRS WFVRLRTLYA 240 DRFDYLNLST GWRECGKANQ ISLGDTIVFE FVKQSVIQVH IFRKGEVRVP SILFIASEIF 300 GPGNAISNRR VRRSENSPKI ISNRGLGQRA VESERASRNR RELVRK

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MARKPKKPSF IKILAGDTSQ SLRVPPAFIT KNFNGRSLCK CDLKGPTGIR RTVELEEREN  60
GLFFHDGWQG FVKDHLLEAG DFLVFSYDGV SKFNVKIYDR SACEKDVEVA KMNEGNQARR  120
KVEVVDIDTE NVKAEVVDID TVNYNQDREK QMIFSSRSCD HLKSRKRPVS NYVEDTSTAS  180
ILLETENPCF LHFLNHRNRL YNVRIPKQLA FDEGLMDKDS VTLQDPDGRS WFVRLRTLYA  240
DRFDYLNLST GWRECGKANQ ISLGDTIVFE FVKQSVIQVH IFRKGEVRVP SILFIASEIF  300
GPGNAISNRR VRRSENSPKI ISNRGLGQRA VESERASRNR RELVRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	3e-16	B3 family protein