PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP012454.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | WOX | ||||||||
Protein Properties | Length: 216aa MW: 24999.9 Da PI: 4.6573 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66.2 | 4.3e-21 | 98 | 158 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++ ql++Le+ Fe+ n +p +++++eL+++l +++e++V++WFqNrRa+ k+ PCP012454.1 98 RQRWTPSPVQLQILEQIFEEgNGTPCKQKIKELTMELtqhgQISETNVYNWFQNRRARSKR 158 89*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 97.2 | 1.3e-31 | 97 | 159 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +r+RWtP+p Q++iLe+++++G tP k++i+++t+eL+++G+i+++NV++WFQNr+aR+++k PCP012454.1 97 SRQRWTPSPVQLQILEQIFEEGNGTPCKQKIKELTMELTQHGQISETNVYNWFQNRRARSKRK 159 789***********************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MMGEWQQQQQ QQIIHQNLQN PEEDDRIGNG NGGLFVKVMT DEQMEQLRQQ IAVYTTICDQ 60 LVDLHKQLSA QQDLTGMRLG NFYCDPFMAS GGHKITSRQR WTPSPVQLQI LEQIFEEGNG 120 TPCKQKIKEL TMELTQHGQI SETNVYNWFQ NRRARSKRKL SMTTQNNAES EAEPEVESPR 180 DEKTKPEDIL SFDNSALRAE NMYLQSPELG FGNFDW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 3e-66 | WOX family protein |