PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PCP011680.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 251aa MW: 27439.5 Da PI: 6.0404 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.2 | 9.3e-19 | 14 | 59 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+++Ed l+++v+q+G+++W++I+ ++ gR++k+c++rw + PCP011680.1 14 KGSWSPQEDATLIKLVAQHGPRNWSLISTGIP-GRSGKSCRLRWCNQ 59 799*****************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 55.4 | 1.4e-17 | 67 | 110 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++++Ed +++a++++G++ W+tIar ++ gRt++ +k++w++ PCP011680.1 67 KPFSPQEDSVIIQAHALHGNK-WATIARLLP-GRTDNAIKNHWNST 110 689******************.*********.***********986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 251 aa Download sequence |
MAMMGAMSGE DRVKGSWSPQ EDATLIKLVA QHGPRNWSLI STGIPGRSGK SCRLRWCNQL 60 SPTVQHKPFS PQEDSVIIQA HALHGNKWAT IARLLPGRTD NAIKNHWNST LRRGRQRAEL 120 SSTSSGSDSA AAVGDEPDMK QQCLRASPVH ESLKANAGGE GVTVETSLTL SPPGEKAENE 180 VVLKSEEEEH GHEAVDNNDD VENCRVETEE TCLLTIMQRM IAREVRNYID SLRENGGPTF 240 GLQSAAHQND P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G67300.1 | 2e-53 | MYB family protein |