PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP010472.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HSF

Protein Properties

Length: 688aa MW: 76098.7 Da PI: 6.2911

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP010472.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	90.5	1.9e-28	42	112	2	81
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEE CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweF 81 Fl+k++e++ed++++ ++sws+ nsfvv+d ++f+ ++Lp+yFkhsnf+SF+RQLn+YgF+kv+ ++ + F PCP010472.1 42 FLTKTFEMVEDPSTDAIVSWSKARNSFVVWDFHKFSVTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDRWE---------F 112 9***************************************************************998844.........3 PP
2	HSF_DNA-bind	90.4	2.2e-28	208	279	2	82
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEE CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFk 82 Fl+k++e++ed++++ ++sws+ nsfvv+d ++f+ ++Lp+yFkhsnf+SF+RQLn+YgF+kv+ ++ weF+ PCP010472.1 208 FLTKTFEMVEDPSTDAIVSWSKARNSFVVWDFHKFSVTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDR---------WEFQ 279 9***************************************************************9988.........4444 PP

Sequence ? help Back to Top
Protein Sequence Length: 688 aa Download sequence
MDGVLVKEEE VVTCTVGSSS SSSSSFSPQP IEGLHEVGPP PFLTKTFEMV EDPSTDAIVS 60 WSKARNSFVV WDFHKFSVTL LPRYFKHSNF SSFIRQLNTY GFRKVDPDRW EFQASTTSAL 120 ALVLSNSGKR IDQAGKKKYL KQVTGRHSDT ELHLNRQLSN LGKPITMDGV LVKEEEVVTC 180 TVGSSSSSSS SFSPQPIEGL HEVGPPPFLT KTFEMVEDPS TDAIVSWSKA RNSFVVWDFH 240 KFSVTLLPRY FKHSNFSSFI RQLNTYGFRK VDPDRWEFQA SKTSAPALVL SNSGKRMDQA 300 EGKKKKLLDP WTRPEPARLI RAGHSAFIDQ VAISRALNGI GLALVTPSIQ SLVADSTDDN 360 NRVVGIPGWR ISFHLVGFIS VVVGILVRLY ATDPHFPDCE TKDSSQNSSS SLWSHVKELA 420 LEAMSVIKIP SFQIVVAQGV TGSFPCCLGG LFGGKMRDIL SMRLPNAGRI ILAQISSTSA 480 IPLAAILLLA LPVDPSTLVI HGFILFIMGF LISWNAPATN NPIFAEIVPE RSRTNVYALD 540 RSFKSILSSF VPPVVGILAQ RVYGYKPVPQ GSSASEEIAT DRGNALSLAK ALYTAIGIPM 600 ALCCVIYSFL YCTYPRDRER ARMEVLIESE MQQIELEDSP TGGEYSRARF PESEELYVND 660 RTVIEVEYEG EDTLDADAND DEQTLLYH

Sequence ? help Back to Top

Protein Sequence Length: 688 aa Download sequence

MDGVLVKEEE VVTCTVGSSS SSSSSFSPQP IEGLHEVGPP PFLTKTFEMV EDPSTDAIVS  60
WSKARNSFVV WDFHKFSVTL LPRYFKHSNF SSFIRQLNTY GFRKVDPDRW EFQASTTSAL  120
ALVLSNSGKR IDQAGKKKYL KQVTGRHSDT ELHLNRQLSN LGKPITMDGV LVKEEEVVTC  180
TVGSSSSSSS SFSPQPIEGL HEVGPPPFLT KTFEMVEDPS TDAIVSWSKA RNSFVVWDFH  240
KFSVTLLPRY FKHSNFSSFI RQLNTYGFRK VDPDRWEFQA SKTSAPALVL SNSGKRMDQA  300
EGKKKKLLDP WTRPEPARLI RAGHSAFIDQ VAISRALNGI GLALVTPSIQ SLVADSTDDN  360
NRVVGIPGWR ISFHLVGFIS VVVGILVRLY ATDPHFPDCE TKDSSQNSSS SLWSHVKELA  420
LEAMSVIKIP SFQIVVAQGV TGSFPCCLGG LFGGKMRDIL SMRLPNAGRI ILAQISSTSA  480
IPLAAILLLA LPVDPSTLVI HGFILFIMGF LISWNAPATN NPIFAEIVPE RSRTNVYALD  540
RSFKSILSSF VPPVVGILAQ RVYGYKPVPQ GSSASEEIAT DRGNALSLAK ALYTAIGIPM  600
ALCCVIYSFL YCTYPRDRER ARMEVLIESE MQQIELEDSP TGGEYSRARF PESEELYVND  660
RTVIEVEYEG EDTLDADAND DEQTLLYH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	3e-49	HSF family protein