PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP009580.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 323aa    MW: 36540.1 Da    PI: 9.1754
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP009580.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.73.3e-161791699
                 EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
           B3 16 lvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                 +++p  f+++  g++     +  l+ +sg++W v+l  + + ++ ++ + GW++Fvk++ L++gDf+vF++ g+s+f  +vk+++k
  PCP009580.1  1 MRIPHAFLKNLsGLS--L-GKCALKGPSGKRWIVEL--EERENGlFFYAVGWQDFVKDHLLQVGDFLVFYYYGESKF--KVKIYDK 79
                 679999997665433..2.3799*************..777777688889*********************999999..9999987 PP
2B356.16.8e-182233031698
                  EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
           B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                   v+pkk a + g+ + +  t++l++esgrsW  k+i r ks+   + lt+GW eF++an++ +gD+v+F+++++s     ++vfr
  PCP009580.1 223 QVIPKKLAISEGLMSMG--TVMLRNESGRSWCAKVILRPKSSFhrMELTTGWAEFCNANQISVGDTVIFEFVKQSVI--QIHVFR 303
                  49******999888555..8*****************999988667889*********************9875554..777777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MRIPHAFLKN LSGLSLGKCA LKGPSGKRWI VELEERENGL FFYAVGWQDF VKDHLLQVGD  60
FLVFYYYGES KFKVKIYDKS ACEKDVEEAD GKSGNPVSLE NYKGNQARVK EEIVESEAEN  120
YDADCENKAT IANRRSGNAM SGKRPTTGYV KETSTTCFTF KSENPCFMET LKKHQEYCVK  180
ASLKVPPLVR ESTTVSIRLR YKVNESVSMF KTNGLSIDIL KFQVIPKKLA ISEGLMSMGT  240
VMLRNESGRS WCAKVILRPK SSFHRMELTT GWAEFCNANQ ISVGDTVIFE FVKQSVIQIH  300
VFRAVRGKRC AVVLDTLNVK NEI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.12e-15B3 family protein