PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP008027.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | TCP | ||||||||
Protein Properties | Length: 189aa MW: 20380.8 Da PI: 10.4397 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 125.6 | 5.4e-39 | 71 | 155 | 2 | 86 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnss 86 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqq++p+i ++tgt++++as+ a+ s+s+++ s PCP008027.1 71 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSILAATGTGTIPASALaAAGGSVSQQG-TS 155 789******************************************************************99854444444433.22 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MDPKGSKQTQ DIPSFLSLPP QPQSQPQQQQ QQPQQPPQPN NNNMSDNKPA EIKDFQIVIA 60 DKDESGKKQL APKRSSNKDR HTKVEGRGRR IRMPALCAAR IFQLTRELGH KSDGETIQWL 120 LQQSEPSILA ATGTGTIPAS ALAAAGGSVS QQGTSLSAGL HQKIDELGGS SGGRTVIIWS 180 SISHHKSGH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27010.1 | 4e-49 | TCP family protein |