PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP006004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | WOX | ||||||||
Protein Properties | Length: 245aa MW: 28110.9 Da PI: 9.1863 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.1 | 3.5e-19 | 12 | 71 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++ +eql Lee+++ r+p+a+++++++++l +++ ++V++WFqN++a++++ PCP006004.1 12 SRWCPAPEQLMLLEEMYKAgVRTPNASQIQRITAQLsfygKIEGKNVFYWFQNHKARDRQ 71 8*****************99*************************************996 PP | |||||||
2 | Wus_type_Homeobox | 116.6 | 1.1e-37 | 10 | 72 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P peQ+++Lee+yk+G+rtPn+++iqrita+L+ yGkie+kNVfyWFQN+kaR+rqk PCP006004.1 10 SSSRWCPAPEQLMLLEEMYKAGVRTPNASQIQRITAQLSFYGKIEGKNVFYWFQNHKARDRQK 72 689***********************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MSRAANSSSS SSRWCPAPEQ LMLLEEMYKA GVRTPNASQI QRITAQLSFY GKIEGKNVFY 60 WFQNHKARDR QKLRKKLCKQ LQQQQLLYHH HNYHNYRNCH YEQQLNQQTF LGCLESPPPV 120 PSALHHKRLS TCHHHNNYSS TGFLPPQVGV EDALINYTWK MEIPEKVERE KSVMSMYGRE 180 WMIMMMNVSP PSPCCTSSSS STTTTTTSTP PLKTLQLFPI TATDLKEEST PSRSALSSST 240 LTENH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28610.1 | 7e-32 | WOX family protein |