PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP005035.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HSF

Protein Properties

Length: 498aa MW: 55653.4 Da PI: 4.8432

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP005035.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.9	9e-35	145	236	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k++++++d+e+++++sws+ +sf+v+d ef++++Lpk+Fkh+nf+SF+RQLn+YgF+kv+ ++ weF+++ F+ gk++ll++ik PCP005035.1 145 FLNKTFQMVDDPETDSIVSWSDARQSFIVWDLYEFSRTLLPKHFKHNNFSSFIRQLNTYGFRKVDPDR---------WEFANERFQGGKRHLLKNIK 232 9**************************************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+++ PCP005035.1 233 RRRR 236 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MVDPDVGGGG DGGGRPSLPW PSKTQLTEPS KNLEEAENEL DRAKEEVTEL KKEEKAVTFS 60 KGRNFDRSSS SSSSTAPPNP AAELLKVKEE TVDVVVVDSD LEGGDHCKTI NGGGGGGDFG 120 SLSSSSSMEL PKPMEGLREA GPPPFLNKTF QMVDDPETDS IVSWSDARQS FIVWDLYEFS 180 RTLLPKHFKH NNFSSFIRQL NTYGFRKVDP DRWEFANERF QGGKRHLLKN IKRRRRYNKK 240 PNVVSADCPK PGLEAEIENV VSADCPKPGL EAEIESLKKD QDFLRLEILK LRQQQKYSQH 300 QLNAFQQQIR SSLCKQQRML FFLTKTAVNP ISVEQLMQKR MIKRELDGGV LGKRRRLPPA 360 QGIESFDEWI NDSLSFDCRN QVQEEPVPMQ TALAEQISEA IASQRNGTPL SSPMVDKSCN 420 AGQVLYPRFM AGKSSSEDMP SAYDDMSDKF LEENIVSNDE CALNDSSFYQ ELEDLIAGPC 480 DWSAYVSNSL VEQAGCIG

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MVDPDVGGGG DGGGRPSLPW PSKTQLTEPS KNLEEAENEL DRAKEEVTEL KKEEKAVTFS  60
KGRNFDRSSS SSSSTAPPNP AAELLKVKEE TVDVVVVDSD LEGGDHCKTI NGGGGGGDFG  120
SLSSSSSMEL PKPMEGLREA GPPPFLNKTF QMVDDPETDS IVSWSDARQS FIVWDLYEFS  180
RTLLPKHFKH NNFSSFIRQL NTYGFRKVDP DRWEFANERF QGGKRHLLKN IKRRRRYNKK  240
PNVVSADCPK PGLEAEIENV VSADCPKPGL EAEIESLKKD QDFLRLEILK LRQQQKYSQH  300
QLNAFQQQIR SSLCKQQRML FFLTKTAVNP ISVEQLMQKR MIKRELDGGV LGKRRRLPPA  360
QGIESFDEWI NDSLSFDCRN QVQEEPVPMQ TALAEQISEA IASQRNGTPL SSPMVDKSCN  420
AGQVLYPRFM AGKSSSEDMP SAYDDMSDKF LEENIVSNDE CALNDSSFYQ ELEDLIAGPC  480
DWSAYVSNSL VEQAGCIG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	228	234	LKNIKRR
2	353	357	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	7e-70	HSF family protein