PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP004039.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | LFY | ||||||||
Protein Properties | Length: 248aa MW: 27676.3 Da PI: 8.7256 | ||||||||
Description | LFY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FLO_LFY | 367.9 | 1.7e-112 | 5 | 224 | 148 | 363 |
FLO_LFY 148 glseepvqeekeaagsggeglgeaelvaaeekkseeekkkaskkkqkr...kkkkelkseededeeeeededeegsgedge...erqrehPfivtepg 239 glseepvq+eke++gsg ++ ++e+v+a e++++++++k+ + ++ +++++++ d+++++ +d +++g+g +g erqrehPfivtepg PCP004039.1 5 GLSEEPVQQEKEMVGSGVGM--AWEVVTAGERRKKQRRMKKGQYRNCSaggGHNNDHNKGVDDKDDDMDDMNGQGNGGGGGllgERQREHPFIVTEPG 100 89**************9888..99999998755555544443333322000233333333666666666666666666555667************** PP FLO_LFY 240 evargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawr 337 evargkknGLDYLf+LyeqCr+fL+qvq+iakerGekcPtkvtnqvfryakk+gasyinkPkmrhYvhCYalhcLd easn lrrafke genvG+wr PCP004039.1 101 EVARGKKNGLDYLFHLYEQCRDFLIQVQNIAKERGEKCPTKVTNQVFRYAKKSGASYINKPKMRHYVHCYALHCLDVEASNVLRRAFKETGENVGSWR 198 ************************************************************************************************** PP FLO_LFY 338 qacykplvaiaarqgwdidavfnahp 363 qacykplv iaa qgwdida+fn+hp PCP004039.1 199 QACYKPLVVIAAGQGWDIDAIFNSHP 224 *************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MGCVGLSEEP VQQEKEMVGS GVGMAWEVVT AGERRKKQRR MKKGQYRNCS AGGGHNNDHN 60 KGVDDKDDDM DDMNGQGNGG GGGLLGERQR EHPFIVTEPG EVARGKKNGL DYLFHLYEQC 120 RDFLIQVQNI AKERGEKCPT KVTNQVFRYA KKSGASYINK PKMRHYVHCY ALHCLDVEAS 180 NVLRRAFKET GENVGSWRQA CYKPLVVIAA GQGWDIDAIF NSHPPSLHLV RSHEAPSALS 240 CRAPQHRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61850.1 | 2e-91 | LFY family protein |