PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP002809.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 568aa MW: 63708.7 Da PI: 7.1103

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP002809.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	64.6	1.8e-20	188	239	3	55
G2-like 3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 r WtpeLH +F a++ L G ++A P++il+ m+v+ +tl +v+SHLQkYR PCP002809.1 188 RTIWTPELHLKFTAALSAL-GDQNARPRSILKWMNVPNITLRQVASHLQKYRK 239 889**************.999***************************6 PP
2	Myb_DNA-binding	29	2.6e-09	190	238	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++ a lG ++++I + m+ + tl q+ s++qky+ PCP002809.1 190 IWTPELHLKFTAALSALGDQnaRPRSILKWMNvPNITLRQVASHLQKYR 238 5***************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MSSEVNMNVA KKTLAEGACF FLQKPISLED LKNVWQHVYR KVRNPRKDTH KPNCAKKIDE 60 AGNVLRPPSG GIRIHEVAGV CRSTAVHDLR LDAQDTRSLR CRSGKVRRGE GNRQRELQCS 120 RAEQQIATEN HTKGAFGIKR PVDDKEEQEK AKKVKLNIEQ TVSGSTNKDE EGKENKDCNG 180 SSEDRRCRTI WTPELHLKFT AALSALGDQN ARPRSILKWM NVPNITLRQV ASHLQKYRKQ 240 VQEIQEAGTT SLPSLSRPYS WNSRNEFPPA RKTSLICRPY EQGTSTFGVQ GNPAQLMTPN 300 SFTRFSDYKR QNPYSEHTVM SHNTNHQSES LYDFYLRTHG KFQNLDQIIE TNGFTLGAGM 360 NEIEKRNHPL GLEESRFQVS ETTLPITNYM TPGFTSPYIS ANTFQLPNAS TSMNQAQFYT 420 PAPTTSINSH NRNHFFAEIT GKTEVGMNQA HYYTPTPTTP INFQNQNHFS AEVTGTTELL 480 EVGPEHIASG NAANAETFPA DFNGGSQQLD AAAIEASPAS SNNNPPMLEY DDLLKLLEED 540 PEEFNWFDSA PNAGDANGYC ELLTETSK

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MSSEVNMNVA KKTLAEGACF FLQKPISLED LKNVWQHVYR KVRNPRKDTH KPNCAKKIDE  60
AGNVLRPPSG GIRIHEVAGV CRSTAVHDLR LDAQDTRSLR CRSGKVRRGE GNRQRELQCS  120
RAEQQIATEN HTKGAFGIKR PVDDKEEQEK AKKVKLNIEQ TVSGSTNKDE EGKENKDCNG  180
SSEDRRCRTI WTPELHLKFT AALSALGDQN ARPRSILKWM NVPNITLRQV ASHLQKYRKQ  240
VQEIQEAGTT SLPSLSRPYS WNSRNEFPPA RKTSLICRPY EQGTSTFGVQ GNPAQLMTPN  300
SFTRFSDYKR QNPYSEHTVM SHNTNHQSES LYDFYLRTHG KFQNLDQIIE TNGFTLGAGM  360
NEIEKRNHPL GLEESRFQVS ETTLPITNYM TPGFTSPYIS ANTFQLPNAS TSMNQAQFYT  420
PAPTTSINSH NRNHFFAEIT GKTEVGMNQA HYYTPTPTTP INFQNQNHFS AEVTGTTELL  480
EVGPEHIASG NAANAETFPA DFNGGSQQLD AAAIEASPAS SNNNPPMLEY DDLLKLLEED  540
PEEFNWFDSA PNAGDANGYC ELLTETSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	4e-18	ARR-B family protein