PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP002226.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TCP

Protein Properties

Length: 365aa MW: 37890.5 Da PI: 7.9798

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP002226.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	114.1	1.8e-35	80	150	3	73
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73 +++++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+++tg+++++a ++ PCP002226.1 80 PARRSSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIQATGSGTIPAIAV 150 67999**********************************************************99888444 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MKSTQRQSLE ESNELERGSY SNNTATSGSS PSVANTPEQN LPATALMMKE ELADPVQQLD 60 QQGSLSMGIV PVPVSTAPKP ARRSSKDRHT KVEGRGRRIR MPATCAARIF QLTRELGHKS 120 DGETIRWLLE HAEPAIIQAT GSGTIPAIAV SVGGTLKIPT TSPARPNGEV TEIPKKRKKM 180 RGSLGEFDDV HDQSSGLAPI APMIYGGGGG GLVPMWPIGG TGAARPVFMF PNSGTIQNQP 240 QLWAIPTADS TAPIFNFQPR AMSNFVSAFP AGVQVGSVGG GDGQLQASSC SISSGAATGG 300 GGSCSSSLGH SLDSAPGTSN TASAATAPPS ASTQMLKDFS LEVYDKRELQ LMGQAANSQT 360 PCSES

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MKSTQRQSLE ESNELERGSY SNNTATSGSS PSVANTPEQN LPATALMMKE ELADPVQQLD  60
QQGSLSMGIV PVPVSTAPKP ARRSSKDRHT KVEGRGRRIR MPATCAARIF QLTRELGHKS  120
DGETIRWLLE HAEPAIIQAT GSGTIPAIAV SVGGTLKIPT TSPARPNGEV TEIPKKRKKM  180
RGSLGEFDDV HDQSSGLAPI APMIYGGGGG GLVPMWPIGG TGAARPVFMF PNSGTIQNQP  240
QLWAIPTADS TAPIFNFQPR AMSNFVSAFP AGVQVGSVGG GDGQLQASSC SISSGAATGG  300
GGSCSSSLGH SLDSAPGTSN TASAATAPPS ASTQMLKDFS LEVYDKRELQ LMGQAANSQT  360
PCSES

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	175	179	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	2e-62	TCP family protein