PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP001807.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 239aa MW: 27984.8 Da PI: 7.9117 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.7 | 8.3e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskR +g+lKKA+E+SvLCda+va+i+fs++gkl+ey++ PCP001807.1 9 KRIENKINRQVTFSKRSTGLLKKAHEISVLCDAQVALIVFSNKGKLFEYAT 59 79***********************************************86 PP | |||||||
2 | K-box | 99.7 | 4.3e-33 | 81 | 174 | 7 | 100 |
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ + + + +++ e+++Lk+++e Lqr++Rh+lGedL+sL+l+e+q+LeqqL+++ k+iR++Kn+l++e+i elqkkek++qe+n+ L kk++e PCP001807.1 81 VEPDFESQGNWTFEYSRLKAKVEVLQRNHRHYLGEDLDSLTLREIQSLEQQLDTAHKQIRQRKNQLMHESITELQKKEKAIQEQNNLLAKKIKE 174 5545566789*********************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MGRGRVQLKR IENKINRQVT FSKRSTGLLK KAHEISVLCD AQVALIVFSN KGKLFEYATD 60 SCMEQILERY ERYSYAERQL VEPDFESQGN WTFEYSRLKA KVEVLQRNHR HYLGEDLDSL 120 TLREIQSLEQ QLDTAHKQIR QRKNQLMHES ITELQKKEKA IQEQNNLLAK KIKEKEKAAA 180 QPEVQNWEQQ NHDLDLLPQP LPCLNIGGTQ QDEFLQARRN QLDLTLEPFY SCHLGCFAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 1e-105 | MIKC_MADS family protein |