PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G15940.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ARR-B
Protein Properties Length: 620aa    MW: 66473 Da    PI: 5.0202
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G15940.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like46.86.4e-15265318255
          G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgL..tlehvkSHLQkYRl 55 
                      +r  Wt+  H++Fv+a eqL  +++  Pk+i++lm+++g+  t ++v SHLQkYR+
  ONIVA05G15940.1 265 TRFTWTTVSHTSFVRAYEQL--KDQEGPKKIKQLMELHGIfvTKTQVSSHLQKYRS 318
                      799*****************..999**************655999**********6 PP
2Response_reg58.44e-20251301107
                      EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH...ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
     Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd...pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                      vl+vdD+ + +e l+ +l  +gy  v+  +++eeal+ ++++    ++++++D+ m+gmdG++ll +i+    ++p+i+++  ++  ++ + + 
  ONIVA05G15940.1  25 VLVVDDDAAYLEELKLMLLLAGY-AVTGKTTAEEALKEVDQNPedyFHIVMTDVHMSGMDGFDLLHRING---RVPVIMFSEGEDVVMVMRTVM 114
                      89*********************.***************7777777**********************98...67******************* PP

                      TTESEEEESS--HHHH CS
     Response_reg  92 aGakdflsKpfdpeel 107
                       Ga d+ +Kp+  e++
  ONIVA05G15940.1 115 NGACDYMVKPMTSEAI 130
                      **********998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 620 aa     Download sequence    
MAENNGSVPP GCKLPAGGFF GRLHVLVVDD DAAYLEELKL MLLLAGYAVT GKTTAEEALK  60
EVDQNPEDYF HIVMTDVHMS GMDGFDLLHR INGRVPVIMF SEGEDVVMVM RTVMNGACDY  120
MVKPMTSEAI KFIWKHVLRW RLSALPANAS SSLQPSDHLA AALAAVAPPP PPAVQLPAAP  180
AQARNRDGEA HEEAELSTQP PALVPSGVQE AAAAVWSSRG DGQEAPPAAV AAAAKAPSKK  240
RGASEVSDRG SNNLEATTGR KKVRTRFTWT TVSHTSFVRA YEQLKDQEGP KKIKQLMELH  300
GIFVTKTQVS SHLQKYRSWL ENERKKEEAT SSSPCNPLSY TNCLDRGYST WKQSSVITEG  360
QQSSSFSGRP IHSMATSNGC LTTTDTQADN YVGVGAKEIE NFISSHQRSL GTAIGQESTI  420
EQASLHSEIT SVSRDAHENG NSQARGSAMS NGTSGTRGVL VTNENLLHVV SASLPSNMGQ  480
PTQPSQSFYT NELAANYSII SDQNPGTSHP ISSSAINNQN SKTQEMSVSQ TVELGCGNDV  540
MLDWPELVGL EDQLDNDVLM NSFFDGDLLQ QGVVTAIDGT QEMLAFDSTG DLGSVPPRGL  600
NNEIASHENT NGKNGASSGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.12e-19ARR-B family protein