PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G23030.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family LFY
Protein Properties Length: 390aa    MW: 42641.4 Da    PI: 8.4779
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G23030.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY545.71.6e-16613791386
          FLO_LFY   1 mdpea.fsas.lfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmks 92 
                      mdp++ fsa+  f+wd  +    +pa + +    +++         a+  releel+ +yGvr++tva+i+elGft+stL+ m+++eldd+m++
  ONIVA04G23030.1   1 MDPNDaFSAAhPFRWDLGPP---APAPVPPPPPPPPP-----PPPPANVPRELEELVAGYGVRMSTVARISELGFTASTLLAMTERELDDMMAA 86 
                      777654776559****5422...22223222222222.....345567789******************************************* PP

          FLO_LFY  93 lseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglgeaelvaaeekkseeekk 186
                      l+ +fr+dll+Ger+G++aa+raer rl++     +++    +++ +++d +sqe+lsee++     +agsgg+g  +++  +++ kk+ ++ +
  ONIVA04G23030.1  87 LAGLFRWDLLLGERFGLRAALRAERGRLMSLG--GRHH---GHQSGSTVDGASQEVLSEEHD-----MAGSGGMGDDDNGRRMVTGKKQAKKGS 170
                      *****************************965..5555...6788899***********976.....678888888888887777766666666 PP

          FLO_LFY 187 kaskk.kqkrkkkkelkseededeeeeededeeg........sgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiak 271
                       a+k  k++rkk ++l+ + +ede +  ded+ g        +g +g erqrehPf+vtepgevar+kknGLDYLf+LyeqCr fLlqvq++ak
  ONIVA04G23030.1 171 AARKGkKARRKKVDDLRLDMQEDEMDCCDEDGGGgsestessAGGGGGERQREHPFVVTEPGEVARAKKNGLDYLFHLYEQCRLFLLQVQSMAK 264
                      555543667777777666644444443333333334455554888899********************************************** PP

          FLO_LFY 272 erGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprL 365
                       +G+k+Ptkvtnqvfryakk+gasyinkPkmrhYvhCYalhcLdeeas+alrra+k+rgenvGawrqacy+plv+i+ar+g+didavf+ahprL
  ONIVA04G23030.1 265 LHGHKSPTKVTNQVFRYAKKVGASYINKPKMRHYVHCYALHCLDEEASDALRRAYKARGENVGAWRQACYAPLVDISARHGFDIDAVFAAHPRL 358
                      ********************************************************************************************** PP

          FLO_LFY 366 siWYvPtkLrqLChlerskas 386
                      +iWYvPt+LrqLCh++rs+++
  ONIVA04G23030.1 359 AIWYVPTRLRQLCHQARSSHA 379
                      ******************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MDPNDAFSAA HPFRWDLGPP APAPVPPPPP PPPPPPPPAN VPRELEELVA GYGVRMSTVA  60
RISELGFTAS TLLAMTEREL DDMMAALAGL FRWDLLLGER FGLRAALRAE RGRLMSLGGR  120
HHGHQSGSTV DGASQEVLSE EHDMAGSGGM GDDDNGRRMV TGKKQAKKGS AARKGKKARR  180
KKVDDLRLDM QEDEMDCCDE DGGGGSESTE SSAGGGGGER QREHPFVVTE PGEVARAKKN  240
GLDYLFHLYE QCRLFLLQVQ SMAKLHGHKS PTKVTNQVFR YAKKVGASYI NKPKMRHYVH  300
CYALHCLDEE ASDALRRAYK ARGENVGAWR QACYAPLVDI SARHGFDIDA VFAAHPRLAI  360
WYVPTRLRQL CHQARSSHAA AAAALPPPLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.12e-97LFY family protein