PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp1324s0008.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 248aa MW: 26833 Da PI: 6.2889 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.9 | 1.4e-19 | 80 | 128 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+W+AeIrd + + r++lg+f t+eeAa+a+++a+k+++g Kaladp1324s0008.1.p 80 YRGIRRRP-WGKWAAEIRDSR----KgFRVWLGTFPTPEEAARAYDEAAKRIRG 128 9*******.**********42....249***********************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MCGGAVISSL IGSNRGPNLI SHDLWHQLDP SSDIFGFNSA TNSKTPITAA DQNPNEKKSE 60 KGANGAAGAD KPKRVRKTAY RGIRRRPWGK WAAEIRDSRK GFRVWLGTFP TPEEAARAYD 120 EAAKRIRGDK AKLNFPEKRL RVEPVESTHP SYEPVGPVLT GAGDAGLICG RNQGYVVGSG 180 LDNTISDLES FLGLNDGSGS TDLKGLFDPV DLDWMDGLVM TENSPFDEPY GVNPDRSLLC 240 LNFDVQP* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 73 | 87 | KRVRKTAYRGIRRRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 4e-42 | ERF family protein |