PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0864s0004.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 243aa MW: 26233.2 Da PI: 4.396 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.2 | 3e-16 | 113 | 163 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +g+++AeIrd + ng r++lg+f++ae Aa a+++a ++ +g Kaladp0864s0004.1.p 113 SYRGVRKRP-WGKFAAEIRDSTRNG--VRVWLGTFDSAETAALAYDQAPLAARG 163 69*******.**********44465..********************9776665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MGSSYNLSPE NPYQVASSPS GFGCWGSPSD CYTNPPVPFT FLDSDEMQLL SILLDLDSSA 60 SSSSPSCISN EPASWIPDER ETTSASEQSS PKDEGVADNA NPASKRKQEN EKSYRGVRKR 120 PWGKFAAEIR DSTRNGVRVW LGTFDSAETA ALAYDQAPLA ARGSAAVLNF PEEIVRRSLE 180 GMIGGGEADG CSPVLALKEK HMTKRRSMSS GKSMAPKEEE SVMVLEDLGT EYLEELLMIS 240 IM* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 8e-42 | ERF family protein |