PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0279s0002.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 260aa MW: 28436.5 Da PI: 6.1376 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.5 | 1.8e-19 | 121 | 170 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 gy+GVr+++ +g+W+AeIrdp + r++lg+f ae+Aa+a+++a+ k++g Kaladp0279s0002.1.p 121 GYRGVRQRP-WGKWAAEIRDP-----HraVRVWLGTFNNAEDAARAYDRAAFKFRG 170 8********.**********7.....338*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
METSFTAGQS PSFRLTSDQE VAAMVAALTT VVTGGGSHQP LPHAATTSYS HDSESASSVW 60 SIESESDTCR FCQLRDCLGC NLFAPNLEAR EPLKGGKNRA AAATGAKKMK KRSDQSGMMR 120 GYRGVRQRPW GKWAAEIRDP HRAVRVWLGT FNNAEDAARA YDRAAFKFRG PRAKLNFPFE 180 DYSSAAEQSS PDSAPQAYQC EPSDRTTDQS LDFDLAGGFG APGMWDFRGN DEVMRQWMMS 240 METGTGEYSD SASVIFQSF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 9e-30 | ERF family protein |