PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0100s0035.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 238aa MW: 27526.3 Da PI: 9.7057 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.6 | 1.6e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvt+skRrng++KKAeEL vLCda+v++i++sst+k++ey+s Kaladp0100s0035.1.p 9 KRIENTTNRQVTYSKRRNGLFKKAEELTVLCDAKVSIIMISSTQKIHEYIS 59 79***********************************************86 PP | |||||||
2 | K-box | 90.6 | 2.9e-30 | 71 | 168 | 1 | 98 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqee 90 yqk+s+++++++++e++++ l+k+k+ ++ L++e+R+++Ge+L++Ls++eL+ Leq+++++++ iR++K++ + + +++l+kk ++++e+ Kaladp0100s0035.1.p 71 YQKASNTDVWSKQYERMEETLRKVKEMNKRLRTEIRQRMGECLNDLSFEELRGLEQDMDNAVTAIRARKYKAIGSRTDTLRKKVRNVEEI 160 8999************************************************************************************** PP K-box 91 nkaLrkkl 98 ++L+++l Kaladp0100s0035.1.p 161 YRKLNQEL 168 ****9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MARGKIQIKR IENTTNRQVT YSKRRNGLFK KAEELTVLCD AKVSIIMISS TQKIHEYISP 60 GITTKQVVDL YQKASNTDVW SKQYERMEET LRKVKEMNKR LRTEIRQRMG ECLNDLSFEE 120 LRGLEQDMDN AVTAIRARKY KAIGSRTDTL RKKVRNVEEI YRKLNQELVS PQPHFEYNRE 180 AREEDRHYGL VDNNNSGDYE SVIALGPRVF ALHLNPNQSA NMQTCAGGSD LTYTLMN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 7e-86 | MIKC_MADS family protein |