PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0095s0779.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 224aa MW: 25011 Da PI: 5.4094 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.4 | 3e-17 | 81 | 131 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 s y GVr ++ +g+++AeIrd + ng r++lg+f+tae Aa a+++a+++ + Kaladp0095s0779.1.p 81 SSYIGVRKRP-WGKFAAEIRDSTRNG--VRVWLGTFDTAESAALAYDQAALASR 131 6799******.**********44465..**********************9765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MDSSFPSYFP YPVDNTITTF PSLHQQQQQD CSFQFPGQVS PYEDCPSYWN YVTACYVQNN 60 SSPENDFINL DEAVRLGKEQ SSYIGVRKRP WGKFAAEIRD STRNGVRVWL GTFDTAESAA 120 LAYDQAALAS RGPMALLNFS EEVVRESLRE LRCTVEENGS PVLALKKKHS KKKRAARVAR 180 RREKIGGGGG DVDDGEMRLS GRNHVLVLED LGADYLEELL SLC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 5e-25 | ERF family protein |