PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0082s0062.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 212aa    MW: 24520.2 Da    PI: 8.4569
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0082s0062.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF79.72e-25959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         kri n +nr vtfskRr gi KKA+E+ vLCda+v++i+f+s+gk++ey+s
  Kaladp0082s0062.1.p  9 KRIANATNRMVTFSKRRCGITKKAKEITVLCDAKVSLIVFASNGKMHEYCS 59
                         79***********************************************96 PP
2K-box72.89.8e-2571167197
                K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqee 90 
                          yq++sgk+l+eak+e+l++e++++kke++n+q e+Rhl Ged++ L++ +L+++e+ Le +l+++R+k +++++++ +++++ e+e++e 
  Kaladp0082s0062.1.p  71 YQNQSGKRLWEAKHENLSNEIDRIKKENDNMQIELRHLRGEDIGALDIPQLMEMEDMLEMGLTNVREKMMDIYKMKKRNTRMLEEETSEL 160
                          899*************************************************************************************99 PP

                K-box  91 nkaLrkk 97 
                            + +++
  Kaladp0082s0062.1.p 161 SYSVHQQ 167
                          9888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MGRGKIEIKR IANATNRMVT FSKRRCGITK KAKEITVLCD AKVSLIVFAS NGKMHEYCSH  60
NSSLSDILDI YQNQSGKRLW EAKHENLSNE IDRIKKENDN MQIELRHLRG EDIGALDIPQ  120
LMEMEDMLEM GLTNVREKMM DIYKMKKRNT RMLEEETSEL SYSVHQQEIS MGVKGRDVVD  180
DEYSGRLRGY NAPMPFSFRV QPIQPNLQDR M*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G20240.13e-78MIKC_MADS family protein