PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0081s0379.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family LFY
Protein Properties Length: 396aa    MW: 44137.9 Da    PI: 7.3103
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0081s0379.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY598.91.1e-18213811386
              FLO_LFY   1 mdpeafsaslfkwdpraaa...aapparlleeaavse.....apleaaaaaaark.lr.....eleelfkayGvryltvakiaelGftvs 76 
                          mdp+af+asl+kwdpr +a   +++p r+++e+++       +p  + ++aa ++ +r     elee+f ayGvry+t+akiaelGftvs
  Kaladp0081s0379.1.p   1 MDPDAFTASLYKWDPRGVAglaQHQP-RIVMEQVAGGggmvlPP-PQPVVAAGYSvVRpremgELEEMFGAYGVRYYTAAKIAELGFTVS 88 
                          9**************99987643344.33333333221222122.222222233223344555*************************** PP

              FLO_LFY  77 tLvdmkdeelddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkll.sedeetaldalsqeg.lseepvqeekeaagsg 164
                          tLvdmk+eeldd+m+sls+ifr++l+vGeryGikaavraerrrl+ee+   +rr+ll s+ ++++ldalsqe+ lseepvq+ekeaagsg
  Kaladp0081s0379.1.p  89 TLVDMKEEELDDMMNSLSQIFRWELMVGERYGIKAAVRAERRRLDEED--LQRRNLLhSAATNATLDALSQEAgLSEEPVQQEKEAAGSG 176
                          **********************************************88..555556626666669*******55***************9 PP

              FLO_LFY 165 geglgeaelvaaeekkseeekkkaskkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfd 254
                          g  + +a++++         + k+     ++k  ++++++ed d      e+++++ e+  erqrehPfivtepgevargkknGLDYLf+
  Kaladp0081s0379.1.p 177 GVWEVAAGATGGG-------RLKQ----VRKKGPRKMSAREDLD------ENDDDTEEGFCERQREHPFIVTEPGEVARGKKNGLDYLFH 249
                          8775555555444.......2222....2233333322222222......222233444579**************************** PP

              FLO_LFY 255 LyeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykpl 344
                          LyeqCrefL+qvq+iak+rGekcP+kvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrr+fkerg nvGawrqacykpl
  Kaladp0081s0379.1.p 250 LYEQCREFLIQVQSIAKDRGEKCPSKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRSFKERGGNVGAWRQACYKPL 339
                          ****************************************************************************************** PP

              FLO_LFY 345 vaiaarqgwdidavfnahprLsiWYvPtkLrqLChlerskas 386
                          v iaarqgwdida+f++hprL+iWYvPtkLrqLCh++rs+as
  Kaladp0081s0379.1.p 340 VLIAARQGWDIDAIFSSHPRLAIWYVPTKLRQLCHAQRSSAS 381
                          ***************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    
MDPDAFTASL YKWDPRGVAG LAQHQPRIVM EQVAGGGGMV LPPPQPVVAA GYSVVRPREM  60
GELEEMFGAY GVRYYTAAKI AELGFTVSTL VDMKEEELDD MMNSLSQIFR WELMVGERYG  120
IKAAVRAERR RLDEEDLQRR NLLHSAATNA TLDALSQEAG LSEEPVQQEK EAAGSGGVWE  180
VAAGATGGGR LKQVRKKGPR KMSAREDLDE NDDDTEEGFC ERQREHPFIV TEPGEVARGK  240
KNGLDYLFHL YEQCREFLIQ VQSIAKDRGE KCPSKVTNQV FRYAKKAGAS YINKPKMRHY  300
VHCYALHCLD EEASNALRRS FKERGGNVGA WRQACYKPLV LIAARQGWDI DAIFSSHPRL  360
AIWYVPTKLR QLCHAQRSSA SASSSVSGGT EHLHF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-148LFY family protein