PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0067s0063.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 232aa MW: 25146.8 Da PI: 5.9153 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.7 | 2.8e-18 | 88 | 138 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrd s +g +r +lg+f taeeAa a+++a+++++g Kaladp0067s0063.1.p 88 RYRGVRRRP-WGKFAAEIRDSSRRG--ARLWLGTFTTAEEAAVAYDKAALRIRG 138 7********.**********43343..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MALGRDGARD GILESVWARV VAGTDGSASS SSGSGRGREV WDEMPSLGLG GSWEELLDDL 60 IMPHASSEAL TEARKRPVSR SESVRARRYR GVRRRPWGKF AAEIRDSSRR GARLWLGTFT 120 TAEEAAVAYD KAALRIRGPR AYLNFPLATK ATNPSDAPPD QRVNSENKPD ATSNYNPRKP 180 SSGCTLGNDQ AIDEPGPWKL ARVEENDGSG LHVIEFDDLG SDFLDSLLAT F* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47220.1 | 4e-15 | ERF family protein |