PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0061s0149.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 261aa MW: 30180.1 Da PI: 8.099 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.6 | 8.8e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr+g+ KKA+E+SvLCdaeva+iifs +gk++eys+ Kaladp0061s0149.1.p 9 KRIENKINRQVTFSKRRTGLVKKAHEISVLCDAEVALIIFSGKGKMFEYST 59 79***********************************************96 PP | |||||||
2 | K-box | 98.6 | 8.9e-33 | 84 | 179 | 5 | 100 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 g s ++ ++e+ + e+ kLk+++e Lqr++Rh lGed++sLs++eLq+Le+qL+++lk++R++Kn+l++e+i+elqkke+++qe+n+ L Kaladp0061s0149.1.p 84 MGASDHSPQEENITMEYHKLKSKLELLQRSHRHCLGEDVDSLSMRELQNLEHQLDTALKRVRARKNQLMHESISELQKKERAMQEQNNLL 173 4455788899******************************************************************************** PP K-box 95 rkklee 100 +k+++e Kaladp0061s0149.1.p 174 TKRVKE 179 *99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MGRGRVELKR IENKINRQVT FSKRRTGLVK KAHEISVLCD AEVALIIFSG KGKMFEYSTD 60 SCMEKILERY ERHSYAERQH YQQMGASDHS PQEENITMEY HKLKSKLELL QRSHRHCLGE 120 DVDSLSMREL QNLEHQLDTA LKRVRARKNQ LMHESISELQ KKERAMQEQN NLLTKRVKEK 180 EKTLMGQQEE AHPHPWAVHH EHHHNHGATS LSSFHSSQPV PSLNAAFAHR GEADDGRMSP 240 NELDLTLEPI YSYHLGCYAA * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 1e-100 | MIKC_MADS family protein |