PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0058s0049.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 216aa MW: 24128.8 Da PI: 5.1864 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.8 | 3.2e-19 | 6 | 55 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr++ +g+Wv+eIr+p +r++lg+f taeeAa+a+++a+ ++g Kaladp0058s0049.1.p 6 KYRGVRQRQ-WGSWVSEIRHP-----LlkRRVWLGTFQTAEEAARAYDQAAILMNG 55 8*****999.**********8.....334**********************98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MVPLRKYRGV RQRQWGSWVS EIRHPLLKRR VWLGTFQTAE EAARAYDQAA ILMNGRNAKT 60 NFPAAEGQQQ SGVNMPRLLS PAALSEKLRK CCKDTCPSLT CLRLDADSSN IGVWQKRAGE 120 RNGSNWVMRI ELGSANKTHN KEQKDSSISD KNKTDFDDDE VSVSVSDNLG LSENDENSKN 180 GGARDDGDDD DEEDKIALQM IEELVNWNCP TPFVN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11190.1 | 8e-59 | ERF family protein |