PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0040s0634.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 162aa MW: 17829.5 Da PI: 10.4697 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.1 | 9e-18 | 47 | 98 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y GVr ++ +g+++AeIrd ++ng r++lgkf+tae Aa a+++a+++ +g Kaladp0040s0634.1.p 47 SSYIGVRKRP-WGKFAAEIRDSTSNG--VRVWLGKFDTAESAALAYDQAALARRG 98 6799******.**********66687..**********************98775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence |
MCSTVHSSFQ VRFYPTKTAP ATGITSQPSP ENFINLDEAV RLGKEQSSYI GVRKRPWGKF 60 AAEIRDSTSN GVRVWLGKFD TAESAALAYD QAALARRGVM ALLNFSEEVV RGSLRELRCT 120 VEENGSPVLA LKKKHSKKLI NKVFVARTKG AIDLRNINQC L* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 4e-26 | ERF family protein |