PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0040s0565.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 212aa MW: 24584.2 Da PI: 8.6507 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 84.7 | 5.4e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien +nr vtfskRr+gi KKA+E+ vLCda+v++iif+s+gk++ey+s Kaladp0040s0565.1.p 9 KRIENATNRMVTFSKRRTGITKKAKEITVLCDAKVSLIIFASNGKMHEYCS 59 79***********************************************96 PP | |||||||
2 | K-box | 74.3 | 3.3e-25 | 71 | 167 | 1 | 97 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqee 90 yq++sgk+l++ak+e+l++e++++kke++n+q e+Rhl Ged++ L++ +L+++e+ Le +l+++R+k +e+++++ +++++ e+e++e Kaladp0040s0565.1.p 71 YQNQSGKRLWDAKHENLSNEIDRVKKENDNMQIELRHLRGEDIGALDIPQLMEMEETLEIGLTNVREKMMEIYKMKKRNTKMLEEEISEL 160 899*************************************************************************************99 PP K-box 91 nkaLrkk 97 + +++ Kaladp0040s0565.1.p 161 SYSVHQQ 167 9888876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MGRGKIEIKR IENATNRMVT FSKRRTGITK KAKEITVLCD AKVSLIIFAS NGKMHEYCSH 60 NTSLSDILDI YQNQSGKRLW DAKHENLSNE IDRVKKENDN MQIELRHLRG EDIGALDIPQ 120 LMEMEETLEI GLTNVREKMM EIYKMKKRNT KMLEEEISEL SYSVHQQEIS MGVKARDVVD 180 DGYSQRVRGY NAQMPFTFRV QPIQPNLQDR M* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G20240.1 | 1e-87 | MIKC_MADS family protein |