PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0040s0366.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 390aa    MW: 42492.8 Da    PI: 9.7136
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0040s0366.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.25.2e-12201246555
                          HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          h + Er+RR ++N++f+ Lr llP+      +K  Ka +L  A++Y+ sLq
  Kaladp0040s0366.1.p 201 HMISERKRRVKMNESFDALRALLPPG-----TKKHKALVLNGAIDYLTSLQ 246
                          8899********************97.....8*****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MAFQDQQGSS SSSSLRSVSM GSPETTALLS TISAATPSSY YDTSQAFRPI TMPPSSSGFG  60
PMYNPIFYQQ AASMHDQPCS FSFHNPPHYP MEAENAVMTN AILAVLSASP SALRHSSTPY  120
FDPLAALEGA SSSRSGSRSA FTRFSTDFLP PTTTQRSPSR VSAFKRIISY TFKSLHLKRL  180
QEMKNEQSGG GKRPTSSQLH HMISERKRRV KMNESFDALR ALLPPGTKKH KALVLNGAID  240
YLTSLQAQVS ELSLRNLRLE AQLLPRSSSS GGAESLSSSS GGAESRLVDI QINNVSESTS  300
NDDRLVDVRV TVRGEINMLS AVTRVAEFFS RVNSFSLMSM DAETLLVADS SAPSNHMFFR  360
LRIEGSVWDE PAFREALRRI VSDVAPTQP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.15e-34bHLH family protein