PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0040s0243.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 287aa    MW: 30793.7 Da    PI: 7.0896
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0040s0243.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.76.5e-191055147
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                         +g+W++eEde+l ++v+ +G ++W+ I + ++ gR++k+c++rw + 
  Kaladp0040s0243.1.p 10 KGPWSAEEDEKLRELVAVHGARNWSVICKSIP-GRSGKSCRLRWCNQ 55
                         79******************************.***********985 PP
2Myb_DNA-binding50.93.5e-1664106347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          ++T+eEde +v a  + G++ W++Iar ++ gRt++++k++w++ 
  Kaladp0040s0243.1.p  64 PFTAEEDEVIVSAQSEVGNR-WAAIARLLN-GRTDNSIKNHWNST 106
                          89******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MEQREVDRIK GPWSAEEDEK LRELVAVHGA RNWSVICKSI PGRSGKSCRL RWCNQLSPEV  60
EHRPFTAEED EVIVSAQSEV GNRWAAIARL LNGRTDNSIK NHWNSTLKRK FSAMAAESNG  120
AVLECGGRPL KRADSVGAGG GCGLGSVLAL SPGSPTGSDL SDSTHPIIQN PPAFRPVLLN  180
DPITDLTLSL PGAPARPASP DPNPSHVPAG SGNPVKQIES MSFGPQLLTM MQEMIKEEVK  240
KVMSNLVIDR NRVIVHSSCD GDENRVSGIG VSKVDQQQQP NGGSRD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67300.14e-69MYB family protein