PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0040s0059.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 243aa MW: 26734.9 Da PI: 5.4247 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55 | 2e-17 | 73 | 123 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +g+++AeIrd + ng r++lg+f++ae Aa a+++a+ +++g Kaladp0040s0059.1.p 73 SYRGVRSRP-WGKFAAEIRDSTRNG--IRVWLGTFDSAEAAALAYDQAAFAMRG 123 69****999.**********44465..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MDFCPQSSSS FSWEDPFNSS LPFNVNDSQE MLLWDMLSSS PATTTSSSEE LQPVQTQDER 60 EVDSVKAAKK SKSYRGVRSR PWGKFAAEIR DSTRNGIRVW LGTFDSAEAA ALAYDQAAFA 120 MRGSAAVLNF PAATVMDSMK GMAVRCEEGC SPVLELKKKH LLRRKSSTMP RKAAKQIGEE 180 NCEGLSRQWK CEKNNVVVFE DLGAEYLEEL LLVSSSSSSS ASYHQQHSPS PSEGVANPSF 240 FF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 9e-37 | ERF family protein |