PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0028s0066.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 241aa MW: 26706.7 Da PI: 8.311 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63 | 6.6e-20 | 112 | 162 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr+++ +g+W+AeIrdp+ r +r++lg+f tae Aa+a+++a+ +++g Kaladp0028s0066.1.p 112 KKYRGVRQRP-WGKWAAEIRDPR----RaARVWLGTFETAEAAARAYDRAAIEFRG 162 59********.**********82....48************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MKKLNNNPDI KPFITNTSLP VSKDEELPSL KHVTAIDPPA LMTQNPHSAS SSWTSSEHDS 60 IISLTDIGAC RRCNFDGCLG CDYFPAEKQS IVIDKKRNNE DVGSKRKYRV KKKYRGVRQR 120 PWGKWAAEIR DPRRAARVWL GTFETAEAAA RAYDRAAIEF RGNRAKLNFP MADYGSSSTA 180 SGDVQMPTVG RGDGSSARSE QAFSKKDGEE EDEGSMEAEA SGRNSDERIW NNDVALDLTR 240 * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 3e-22 | ERF family protein |